RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 MXD3Q9BW11 206 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
CDH5-208ENST00000614547 TAS2R14Q9NYV8 317 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 SLC12A6Q9UHW9 1150 aa12.66□□□□□ -0.38
CDH5-208ENST00000614547 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
CDH5-208ENST00000614547 FLT1P17948 1338 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 HNRNPH3P31942 346 aaKnown RBP12.65□□□□□ -0.38
CDH5-208ENST00000614547 CETN2P41208 172 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 RCN2Q14257 317 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 STXBP4Q6ZWJ1 553 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 APBB1IPQ7Z5R6 666 aaPredicted RBP12.65□□□□□ -0.38
CDH5-208ENST00000614547 AMIGO3Q86WK7 504 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 RPUSD2Q8IZ73 545 aaKnown RBP12.65□□□□□ -0.38
CDH5-208ENST00000614547 MREGQ8N565 214 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 ACTRT1Q8TDG2 376 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 SPIRE2Q8WWL2 714 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 RUNDC3BQ96NL0 473 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 ACP6Q9NPH0 428 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 DLGAP2Q9P1A6 1054 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 AGAP1Q9UPQ3 857 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 RPL21P46778 160 aaKnown RBP12.65□□□□□ -0.38
CDH5-208ENST00000614547 SLMAPQ14BN4 828 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 RNF207Q6ZRF8 634 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
CDH5-208ENST00000614547 GBP5Q96PP8 586 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 KLF6Q99612 283 aaPredicted RBP12.65□□□□□ -0.38
CDH5-208ENST00000614547 KLHL11Q9NVR0 708 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 BSDC1Q9NW68 430 aaPredicted RBP12.65□□□□□ -0.38
CDH5-208ENST00000614547 ARL2BPQ9Y2Y0 163 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 LAMA4Q16363 1823 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 RGPD2P0DJD1 1756 aa12.65□□□□□ -0.38
CDH5-208ENST00000614547 EXOC1LA0A1B0GW35 172 aa12.65□□□□□ -0.39
CDH5-208ENST00000614547 PIAS1O75925 651 aa12.65□□□□□ -0.39
CDH5-208ENST00000614547 COMTP21964 271 aa12.65□□□□□ -0.39
CDH5-208ENST00000614547 RASSF2P50749 326 aa12.65□□□□□ -0.39
CDH5-208ENST00000614547 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.39
CDH5-208ENST00000614547 CALR3Q96L12 384 aaKnown RBP12.65□□□□□ -0.39
CDH5-208ENST00000614547 LRRC37BQ96QE4 947 aa12.65□□□□□ -0.39
CDH5-208ENST00000614547 IKBKGQ9Y6K9 419 aa12.65□□□□□ -0.39
CDH5-208ENST00000614547 hCG_2014768A0A024R1R8 64 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 ARHGEF35A5YM69 484 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 LUC7L3O95232 432 aaKnown RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 AGTP01019 485 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 AKR1B1P15121 316 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 KRT17Q04695 432 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 ANKRD20A3Q5VUR7 823 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 ARHGEF18Q6ZSZ5 1173 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 BZW1Q7L1Q6 419 aaKnown RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 NT5DC3Q86UY8 548 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 FAM228AQ86W67 206 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 ADGRF4Q8IZF3 695 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 SLC20A1Q8WUM9 679 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 P3H4Q92791 437 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 BICD1Q96G01 975 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 SCAF8Q9UPN6 1271 aaKnown RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 ZNF148Q9UQR1 794 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 GH1P01241 217 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 HARSP12081 509 aaKnown RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 CYP11B2P19099 503 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 SOX5P35711 763 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 MAPK7Q13164 816 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 GRIK5Q16478 980 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 TMEM154Q6P9G4 183 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 EPM2AIP1Q7L775 607 aaPredicted RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 SCFD2Q8WU76 684 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 VCXQ9H320 206 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDH5-208ENST00000614547 SUCLA2Q9P2R7 463 aaPredicted RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 G3BP2Q9UN86 482 aaKnown RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 CFAP69A5D8W1 941 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 K7ENM7 598 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 MED24O75448 989 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 IRX1P78414 480 aaPredicted RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 COG2Q14746 738 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 ANKRD20A2Q5SQ80 823 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 ANKRD20A1Q5TYW2 823 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 FYB2Q5VWT5 728 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 CNBD1Q8NA66 436 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 CFAP61Q8NHU2 1237 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 ANO3Q9BYT9 981 aa12.64□□□□□ -0.39
CDH5-208ENST00000614547 IQCGQ9H095 443 aaKnown RBP12.64□□□□□ -0.39
CDH5-208ENST00000614547 PALM3A6NDB9 673 aaPredicted RBP12.63□□□□□ -0.39
CDH5-208ENST00000614547 SORBS3O60504 671 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 OVGP1Q12889 678 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 PPP2R5EQ16537 467 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 CROCCP2Q86T23 111 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
CDH5-208ENST00000614547 HIPK4Q8NE63 616 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 DYDC2Q96IM9 177 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 MYH6P13533 1939 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 CCND1P24385 295 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 SYCP2LQ5T4T6 812 aa12.63□□□□□ -0.39
CDH5-208ENST00000614547 INTS5Q6P9B9 1019 aaKnown RBP12.63□□□□□ -0.39
CDH5-208ENST00000614547 SAYSD1Q9NPB0 183 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms