RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
CSTF1-208ENST00000613138 ZNF710Q8N1W2 664 aa14.07□□□□□ -0.16
CSTF1-208ENST00000613138 HELQQ8TDG4 1101 aa14.07□□□□□ -0.16
CSTF1-208ENST00000613138 TCP11Q8WWU5 503 aa14.07□□□□□ -0.16
CSTF1-208ENST00000613138 CASD1Q96PB1 797 aa14.07□□□□□ -0.16
CSTF1-208ENST00000613138 EIF2AQ9BY44 585 aaKnown RBP14.07□□□□□ -0.16
CSTF1-208ENST00000613138 ALG13Q9NP73 1137 aaKnown RBP14.07□□□□□ -0.16
CSTF1-208ENST00000613138 C1orf112Q9NSG2 853 aa14.07□□□□□ -0.16
CSTF1-208ENST00000613138 TMEM161AQ9NX61 479 aa14.07□□□□□ -0.16
CSTF1-208ENST00000613138 PPME1Q9Y570 386 aa14.07□□□□□ -0.16
CSTF1-208ENST00000613138 TDRD15B5MCY1 1934 aaKnown RBP14.06□□□□□ -0.16
CSTF1-208ENST00000613138 TCHHQ07283 1943 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 NPHP3-ACAD11A0A0J9YXS1 232 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 LRRIQ4A6NIV6 560 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 INO80B-WBP1J3KQ70 363 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 LAD1O00515 517 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 STX6O43752 255 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 B4GALT3O60512 393 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 TSPAN1O60635 241 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 XRCC6P12956 609 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSTF1-208ENST00000613138 SFPQP23246 707 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSTF1-208ENST00000613138 BMPR1AP36894 532 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 PHKA2P46019 1235 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 ODR4Q5SWX8 454 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 CMTR2Q8IYT2 770 aaKnown RBP14.06□□□□□ -0.16
CSTF1-208ENST00000613138 CLP1Q92989 425 aaKnown RBP14.06□□□□□ -0.16
CSTF1-208ENST00000613138 CHAMP1Q96JM3 812 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 CLIC6Q96NY7 704 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 USP28Q96RU2 1077 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 INO80BQ9C086 356 aaPredicted RBP14.06□□□□□ -0.16
CSTF1-208ENST00000613138 CWH43Q9H720 699 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 AGPAT5Q9NUQ2 364 aa14.06□□□□□ -0.16
CSTF1-208ENST00000613138 TYW1Q9NV66 732 aaKnown RBP14.06□□□□□ -0.16
CSTF1-208ENST00000613138 A0A0U1RQF3 1178 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 H3BNC9 293 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 GAS2O43903 313 aaKnown RBP14.05□□□□□ -0.16
CSTF1-208ENST00000613138 ITGB1P05556 798 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 LIG1P18858 919 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 CYP11B2P19099 503 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 PDCP20941 246 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 CACNB1Q02641 598 aaPredicted RBP14.05□□□□□ -0.16
CSTF1-208ENST00000613138 TFF2Q03403 129 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 CAMK1Q14012 370 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 KRT79Q5XKE5 535 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 SRGAP1Q7Z6B7 1085 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.05□□□□□ -0.16
CSTF1-208ENST00000613138 DAW1Q8N136 415 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 FAM105AQ9NUU6 356 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 HES2Q9Y543 173 aa14.05□□□□□ -0.16
CSTF1-208ENST00000613138 SFI1A8K8P3 1242 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 ASAP2O43150 1006 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 GTPBP6O43824 516 aaPredicted RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 HIP1RO75146 1068 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 EYA4O95677 639 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 SSBP05455 408 aaKnown RBP eCLIP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 ARF4P18085 180 aaPredicted RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 POU3F3P20264 500 aaPredicted RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 IRS1P35568 1242 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 CDC42EP1Q00587 391 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 MAPK7Q13164 816 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 MXD4Q14582 209 aaPredicted RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 KARSQ15046 597 aaKnown RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 SKIV2LQ15477 1246 aaKnown RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 TMEM119Q4V9L6 283 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 SPOUT1Q5T280 376 aaKnown RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 RINT1Q6NUQ1 792 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 CABP7Q86V35 215 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 EXOC8Q8IYI6 725 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 KLHL23Q8NBE8 558 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 SMG8Q8ND04 991 aaKnown RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 EPSTI1Q96J88 318 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 CSRNP2Q9H175 543 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 ELAC1Q9H777 363 aaKnown RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 TFIP11Q9UBB9 837 aaKnown RBP14.04□□□□□ -0.16
CSTF1-208ENST00000613138 INPP5FQ9Y2H2 1132 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 PCDHB2Q9Y5E7 798 aa14.04□□□□□ -0.16
CSTF1-208ENST00000613138 NT5C1B-RDH14C9J2C7 533 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 C5orf67F2Z3F1 127 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 GTF2F1P35269 517 aaKnown RBP eCLIP14.03□□□□□ -0.16
CSTF1-208ENST00000613138 DHX8Q14562 1220 aaKnown RBP14.03□□□□□ -0.16
CSTF1-208ENST00000613138 HYIQ5T013 277 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 ARL6IP4Q66PJ3 421 aaKnown RBP14.03□□□□□ -0.16
CSTF1-208ENST00000613138 AGMOQ6ZNB7 445 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 C1orf186Q6ZWK4 172 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 IFNLR1Q8IU57 520 aaPredicted RBP14.03□□□□□ -0.16
CSTF1-208ENST00000613138 COLGALT1Q8NBJ5 622 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 MCPH1Q8NEM0 835 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 APOL6Q9BWW8 343 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 RAB34Q9BZG1 259 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 TMEM117Q9H0C3 514 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 CXCL16Q9H2A7 254 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 CHST12Q9NRB3 414 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 FBXO2Q9UK22 296 aaPredicted RBP14.03□□□□□ -0.16
CSTF1-208ENST00000613138 PLAGL2Q9UPG8 496 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 DNM3Q9UQ16 869 aa14.03□□□□□ -0.16
CSTF1-208ENST00000613138 ERLIN2O94905 339 aa14.02□□□□□ -0.17
CSTF1-208ENST00000613138 NPTXRO95502 500 aa14.02□□□□□ -0.17
CSTF1-208ENST00000613138 PLCG1P19174 1290 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms