RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 RIT2Q99578 217 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 GCOM2Q9BZD3 368 aaPredicted RBP26.39■■□□□ 1.82
MMP28-203ENST00000612672 GBP3Q9H0R5 595 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 CHST12Q9NRB3 414 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 FAM105AQ9NUU6 356 aa26.39■■□□□ 1.82
MMP28-203ENST00000612672 PIN4Q9Y237 131 aaKnown RBP26.39■■□□□ 1.82
MMP28-203ENST00000612672 CLCN5P51795 746 aa26.38■■□□□ 1.81
MMP28-203ENST00000612672 MCTP2Q6DN12 878 aa26.38■■□□□ 1.81
MMP28-203ENST00000612672 GPR149Q86SP6 731 aa26.38■■□□□ 1.81
MMP28-203ENST00000612672 FLCNQ8NFG4 579 aa26.38■■□□□ 1.81
MMP28-203ENST00000612672 TEKT3Q9BXF9 490 aa26.38■■□□□ 1.81
MMP28-203ENST00000612672 NIFKQ9BYG3 293 aaKnown RBP26.38■■□□□ 1.81
MMP28-203ENST00000612672 MFSD1Q9H3U5 465 aa26.38■■□□□ 1.81
MMP28-203ENST00000612672 CYP26B1Q9NR63 512 aa26.38■■□□□ 1.81
MMP28-203ENST00000612672 EP300Q09472 2414 aaPredicted RBP26.38■■□□□ 1.81
MMP28-203ENST00000612672 N4BP1O75113 896 aaKnown RBP26.37■■□□□ 1.81
MMP28-203ENST00000612672 GNA11P29992 359 aa26.37■■□□□ 1.81
MMP28-203ENST00000612672 JAK3P52333 1124 aa26.37■■□□□ 1.81
MMP28-203ENST00000612672 AGMOQ6ZNB7 445 aa26.37■■□□□ 1.81
MMP28-203ENST00000612672 CABP7Q86V35 215 aa26.37■■□□□ 1.81
MMP28-203ENST00000612672 CCDC12Q8WUD4 166 aaPredicted RBP26.37■■□□□ 1.81
MMP28-203ENST00000612672 KLHL5Q96PQ7 755 aa26.37■■□□□ 1.81
MMP28-203ENST00000612672 LILRB3O75022 631 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 DDHD2O94830 711 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 TDP2O95551 362 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 SSBP05455 408 aaKnown RBP eCLIP26.36■■□□□ 1.81
MMP28-203ENST00000612672 CNPP09543 421 aaKnown RBP26.36■■□□□ 1.81
MMP28-203ENST00000612672 SFNP31947 248 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 CLCN4P51793 760 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 BMP2KLQ5H9B9 411 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 GLB1LQ6UWU2 654 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 RHPN2Q8IUC4 686 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 PLCD3Q8N3E9 789 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 SFXN1Q9H9B4 322 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 ARID2Q68CP9 1835 aa26.36■■□□□ 1.81
MMP28-203ENST00000612672 NARSO43776 548 aaKnown RBP26.35■■□□□ 1.81
MMP28-203ENST00000612672 AOC1P19801 751 aa26.35■■□□□ 1.81
MMP28-203ENST00000612672 SFPQP23246 707 aaKnown RBP eCLIP26.35■■□□□ 1.81
MMP28-203ENST00000612672 PLA2G4FQ68DD2 849 aa26.35■■□□□ 1.81
MMP28-203ENST00000612672 MIER3Q7Z3K6 550 aa26.35■■□□□ 1.81
MMP28-203ENST00000612672 SUCLA2Q9P2R7 463 aaPredicted RBP26.35■■□□□ 1.81
MMP28-203ENST00000612672 ZNF623O75123 536 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 XKR3Q5GH77 459 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 CCDC149Q6ZUS6 474 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 ANO5Q75V66 913 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 TBCKQ8TEA7 893 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 NKD2Q969F2 451 aaPredicted RBP26.34■■□□□ 1.81
MMP28-203ENST00000612672 NLRP4Q96MN2 994 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 SLC26A6Q9BXS9 759 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 KCNK12Q9HB15 430 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 IFT122Q9HBG6 1241 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 NCOA5Q9HCD5 579 aaKnown RBP26.34■■□□□ 1.81
MMP28-203ENST00000612672 DUSP12Q9UNI6 340 aa26.34■■□□□ 1.81
MMP28-203ENST00000612672 CCDC196A0A1B0GTZ2 297 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 MAFO75444 373 aaPredicted RBP26.33■■□□□ 1.81
MMP28-203ENST00000612672 USP11P51784 963 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 RNASELQ05823 741 aaKnown RBP26.33■■□□□ 1.81
MMP28-203ENST00000612672 TDGQ13569 410 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 GIT2Q14161 759 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 KRT32Q14532 448 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 BMS1Q14692 1282 aaKnown RBP26.33■■□□□ 1.81
MMP28-203ENST00000612672 CATSPER4Q7RTX7 472 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 ZNF410Q86VK4 478 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 CCDC105Q8IYK2 499 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 ZNF579Q8NAF0 562 aaKnown RBP26.33■■□□□ 1.81
MMP28-203ENST00000612672 TMEM87AQ8NBN3 555 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 KCNB2Q92953 911 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 MINDY3Q9H8M7 445 aa26.33■■□□□ 1.81
MMP28-203ENST00000612672 FGD1P98174 961 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 Q4G0T1 1027 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 UBXN11Q5T124 520 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 ADSSL1Q8N142 457 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 ETNPPLQ8TBG4 499 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 BICD2Q8TD16 824 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 RSAD2Q8WXG1 361 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 JAKMIP1Q96N16 626 aaKnown RBP26.32■■□□□ 1.8
MMP28-203ENST00000612672 RNF26Q9BY78 433 aaPredicted RBP26.32■■□□□ 1.8
MMP28-203ENST00000612672 AGPAT5Q9NUQ2 364 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 MARCH5Q9NX47 278 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 PCDHB2Q9Y5E7 798 aa26.32■■□□□ 1.8
MMP28-203ENST00000612672 TAS1R1Q7RTX1 841 aa26.31■■□□□ 1.8
MMP28-203ENST00000612672 SIX5Q8N196 739 aa26.31■■□□□ 1.8
MMP28-203ENST00000612672 CCDC148Q8NFR7 591 aa26.31■■□□□ 1.8
MMP28-203ENST00000612672 RDM1Q8NG50 284 aa26.31■■□□□ 1.8
MMP28-203ENST00000612672 ACSF2Q96CM8 615 aaPredicted RBP26.31■■□□□ 1.8
MMP28-203ENST00000612672 AGXT2Q9BYV1 514 aa26.31■■□□□ 1.8
MMP28-203ENST00000612672 SNX14Q9Y5W7 946 aa26.31■■□□□ 1.8
MMP28-203ENST00000612672 TDRD15B5MCY1 1934 aaKnown RBP26.31■■□□□ 1.8
MMP28-203ENST00000612672 DOCK6Q96HP0 2047 aa26.31■■□□□ 1.8
MMP28-203ENST00000612672 MTCL1Q9Y4B5 1905 aaKnown RBP26.3■■□□□ 1.8
MMP28-203ENST00000612672 DDX11L8A8MPP1 907 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 EML1O00423 815 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 HMGB1P09429 215 aaKnown RBP26.3■■□□□ 1.8
MMP28-203ENST00000612672 MYBP10242 640 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 KLRC2P26717 231 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 RAB27AP51159 221 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 NPEPPSP55786 919 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 ANGPT1Q15389 498 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 NPY5RQ15761 445 aa26.3■■□□□ 1.8
MMP28-203ENST00000612672 LETM2Q2VYF4 491 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms