RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ATP2A1O14983 1001 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 SLITRK3O94933 977 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 CARSP49589 748 aaKnown RBP15.98■□□□□ 0.15
CDH1-213ENST00000612417 ZNF131P52739 623 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 KCNA1Q09470 495 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 PGM5Q15124 567 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 TKFCQ3LXA3 575 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 TCERG1LQ5VWI1 586 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 MAP1SQ66K74 1059 aaPredicted RBP15.98■□□□□ 0.15
CDH1-213ENST00000612417 PRRT2Q7Z6L0 340 aaPredicted RBP15.98■□□□□ 0.15
CDH1-213ENST00000612417 SLFN11Q7Z7L1 901 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 IQCKQ8N0W5 287 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 WHAMMQ8TF30 809 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 OPTNQ96CV9 577 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 CALR3Q96L12 384 aaKnown RBP15.98■□□□□ 0.15
CDH1-213ENST00000612417 ACAD9Q9H845 621 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 EPB41L5Q9HCM4 733 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 KCNH7Q9NS40 1196 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 KCND2Q9NZV8 630 aa15.98■□□□□ 0.15
CDH1-213ENST00000612417 AJAP1Q9UKB5 411 aaPredicted RBP15.98■□□□□ 0.15
CDH1-213ENST00000612417 RRP15Q9Y3B9 282 aaKnown RBP15.98■□□□□ 0.15
CDH1-213ENST00000612417 FAM13AO94988 1023 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 POTEJP0CG39 1038 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 FERP16591 822 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 PSMC2P35998 433 aaKnown RBP15.97■□□□□ 0.15
CDH1-213ENST00000612417 NPEPPSP55786 919 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 MRPS9P82933 396 aaKnown RBP15.97■□□□□ 0.15
CDH1-213ENST00000612417 GUCY2DQ02846 1103 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 FOXR1Q6PIV2 292 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 TPH2Q8IWU9 490 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 PROCA1Q8NCQ7 364 aaPredicted RBP15.97■□□□□ 0.15
CDH1-213ENST00000612417 TPCN2Q8NHX9 752 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 FIZ1Q96SL8 496 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 RUFY1Q96T51 708 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 KRT12Q99456 494 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 PARVGQ9HBI0 331 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 NFU1Q9UMS0 254 aa15.97■□□□□ 0.15
CDH1-213ENST00000612417 MYO1CO00159 1063 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 CLIC2O15247 247 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 PPIL2Q13356 520 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 CD302Q8IX05 232 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 FAM186BQ8IYM0 893 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 SCFD2Q8WU76 684 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 ZIM3Q96PE6 472 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 ODF2LQ9ULJ1 636 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 DAAM1Q9Y4D1 1078 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 A6NNZ2 444 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 BHMG1C9JSJ3 638 aaPredicted RBP15.96■□□□□ 0.15
CDH1-213ENST00000612417 KCNK3O14649 394 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 BCRP11274 1271 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 SKOR1P84550 965 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 MTMR1Q13613 665 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 CTTNQ14247 550 aaKnown RBP15.96■□□□□ 0.15
CDH1-213ENST00000612417 TUBB8Q3ZCM7 444 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 NIPA1Q7RTP0 329 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 C1orf131Q8NDD1 294 aaKnown RBP15.96■□□□□ 0.15
CDH1-213ENST00000612417 OLIG1Q8TAK6 271 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 PIGOQ8TEQ8 1089 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 LMBR1Q8WVP7 490 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 CASKIN2Q8WXE0 1202 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 DYDC2Q96IM9 177 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 RIT2Q99578 217 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 PDCD2LQ9BRP1 358 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 UNC45AQ9H3U1 944 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 BCAS3Q9H6U6 928 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 PCDHB13Q9Y5F0 798 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 UBIAD1Q9Y5Z9 338 aa15.96■□□□□ 0.15
CDH1-213ENST00000612417 TESPA1A2RU30 521 aaPredicted RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 ZSCAN5CA6NGD5 496 aaPredicted RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 DDX3XO00571 662 aaKnown RBP eCLIP15.95■□□□□ 0.14
CDH1-213ENST00000612417 RAD51CO43502 376 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 PEX10O60683 326 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 H2AFZP0C0S5 128 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 CCND2P30279 289 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 STAT1P42224 750 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 DNA2P51530 1060 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 TTMPQ5BVD1 217 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 STXBP4Q6ZWJ1 553 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 H2AFVQ71UI9 128 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 FMNL3Q8IVF7 1028 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 SYCE1Q8N0S2 351 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 MYCT1Q8N699 235 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 SLC10A4Q96EP9 437 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 PAGR1Q9BTK6 254 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 DMAC2Q9NW81 257 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 SUCLA2Q9P2R7 463 aaPredicted RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 FEZ2Q9UHY8 353 aaPredicted RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 LCMT1Q9UIC8 334 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 STXBP5LQ9Y2K9 1186 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 FAM153BP0C7A2 387 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 NMT1P30419 496 aaKnown RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 NOP2P46087 812 aaKnown RBP15.95■□□□□ 0.14
CDH1-213ENST00000612417 FMO5P49326 533 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 IRAK1P51617 712 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 PPP2R5AQ15172 486 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 FAM153CQ494X1 144 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 B3GNT9Q6UX72 402 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 ZNF720Q7Z2F6 126 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 RASGEF1CQ8N431 466 aa15.95■□□□□ 0.14
CDH1-213ENST00000612417 SLC30A5Q8TAD4 765 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms