RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FAM133BQ5BKY9 247 aaKnown RBP15.18■□□□□ 0.02
COL6A1-207ENST00000612273 DENND2CQ68D51 928 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 C1orf186Q6ZWK4 172 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 ZNF720Q7Z2F6 126 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 CD302Q8IX05 232 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 C1orf54Q8WWF1 131 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 SAAL1Q96ER3 474 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-207ENST00000612273 CYP26A1O43174 497 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 SGPL1O95470 568 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 MMEP08473 750 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 PPP3CAQ08209 521 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 SEPT12Q8IYM1 358 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 PRMT6Q96LA8 375 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-207ENST00000612273 PWWP2AQ96N64 755 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 ELAC2Q9BQ52 826 aaKnown RBP15.18■□□□□ 0.02
COL6A1-207ENST00000612273 ERP44Q9BS26 406 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 VEZTQ9HBM0 779 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 STXBP5LQ9Y2K9 1186 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 RGS16O15492 202 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-207ENST00000612273 DDX3YO15523 660 aaKnown RBP15.18■□□□□ 0.02
COL6A1-207ENST00000612273 TRAPPC3O43617 180 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 COMTP21964 271 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 FNTAP49354 379 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 PMS2P54278 862 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 LLGL2Q6P1M3 1020 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 ANKRD42Q8N9B4 389 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 ATP8B4Q8TF62 1192 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
COL6A1-207ENST00000612273 TBC1D31Q96DN5 1066 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 CALR3Q96L12 384 aaKnown RBP15.18■□□□□ 0.02
COL6A1-207ENST00000612273 HSD17B14Q9BPX1 270 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 UNC45AQ9H3U1 944 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 NYAP2Q9P242 653 aa15.18■□□□□ 0.02
COL6A1-207ENST00000612273 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 ECM2O94769 699 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-207ENST00000612273 CPP00450 1065 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 GKAP1Q5VSY0 366 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-207ENST00000612273 TMEM179Q6ZVK1 233 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 ZDHHC14Q8IZN3 488 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 DYDC1Q8WWB3 177 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 GLIS2Q9BZE0 524 aaPredicted RBP15.17■□□□□ 0.02
COL6A1-207ENST00000612273 GLT8D2Q9H1C3 349 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 SLC40A1Q9NP59 571 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 TBK1Q9UHD2 729 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 STAT2P52630 851 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 SOX10P56693 466 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 BFSP1Q12934 665 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 MTMR3Q13615 1198 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 AOC3Q16853 763 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 Q4G0T1 1027 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 ARHGAP27Q6ZUM4 889 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 ATG4AQ8WYN0 398 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 MRRFQ96E11 262 aaKnown RBP15.17■□□□□ 0.02
COL6A1-207ENST00000612273 THOC1Q96FV9 657 aaKnown RBP15.17■□□□□ 0.02
COL6A1-207ENST00000612273 CRAMP1Q96RY5 1269 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 PRMT1Q99873 361 aaKnown RBP15.17■□□□□ 0.02
COL6A1-207ENST00000612273 RAB17Q9H0T7 212 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 SLITRK6Q9H5Y7 841 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 FAM114A2Q9NRY5 505 aa15.17■□□□□ 0.02
COL6A1-207ENST00000612273 FOSP01100 380 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 PYGMP11217 842 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 SSR1P43307 286 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 RPL21P46778 160 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 DGKZQ13574 1117 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 ZKSCAN8Q15776 578 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 LONRF1Q17RB8 773 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 TTC27Q6P3X3 843 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 PNMA8AQ86V59 439 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 NEK9Q8TD19 979 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 DHX38Q92620 1227 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 AGPAT1Q99943 283 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 GPR88Q9GZN0 384 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 KLC4Q9NSK0 619 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 IGLV3-22A0A075B6J6 115 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 POLR2MP0CAP2 368 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 ZBTB48P10074 688 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 DLATP10515 647 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 CREB1P16220 341 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 PPP1R7Q15435 360 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 CCDC137Q6PK04 289 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 SLFN11Q7Z7L1 901 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 SLC47A2Q86VL8 602 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 CRYGNQ8WXF5 182 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 TOPORSQ9NS56 1045 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 CCDC169A6NNP5 214 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 A6NNZ2 444 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 IPO5O00410 1097 aaKnown RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 SLC16A4O15374 487 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 MMP10P09238 476 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 TMEM253P0C7T8 217 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 TUBB8Q3ZCM7 444 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 GRIPAP1Q4V328 841 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 ZFYVE27Q5T4F4 411 aa15.16■□□□□ 0.02
COL6A1-207ENST00000612273 LMBRD2Q68DH5 695 aaPredicted RBP15.16■□□□□ 0.02
COL6A1-207ENST00000612273 HHIPL2Q6UWX4 724 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms