RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 GH2P01242 217 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 TMEM253P0C7T8 217 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 TRIM49P0CI25 452 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 TRIM49CP0CI26 452 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 CHN1P15882 459 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 FGFR2P21802 821 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 VCX3AQ9NNX9 186 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 STOML1Q9UBI4 398 aa11.68□□□□□ -0.54
CDC42EP3-206ENST00000611976 TCRBV5S4A2TA0A5A2 114 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 UBE4BO95155 1302 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 P4HBP07237 508 aaKnown RBP11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 METTL13Q8N6R0 699 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 CAVIN3Q969G5 261 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 NCAPGQ9BPX3 1015 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 TRIM51Q9BSJ1 452 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 ZFP69BQ9UJL9 534 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 ARL2BPQ9Y2Y0 163 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 EMSYQ7Z589 1322 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 SASH3O75995 380 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 CALB1P05937 261 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 STAT4Q14765 748 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 MCPH1Q8NEM0 835 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 TPX2Q9ULW0 747 aaKnown RBP11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 CAPN6Q9Y6Q1 641 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 PLEKP08567 350 aaPredicted RBP11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 ACTN1P12814 892 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 POLD1P28340 1107 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 FMO5P49326 533 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 KRT17Q04695 432 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 SPATA21Q7Z572 469 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 CCDC97Q96F63 343 aaPredicted RBP11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 REEP2Q9BRK0 252 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 HAUS2Q9NVX0 235 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 SENP1Q9P0U3 644 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 UVRAGQ9P2Y5 699 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 CLRN2A0PK11 232 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 KRT37O76014 449 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 FGFR4P22455 802 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 SLC1A1P43005 524 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 PKN1Q16512 942 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 ZNF746Q6NUN9 644 aaPredicted RBP11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 TRIM72Q6ZMU5 477 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 RHOT1Q8IXI2 618 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 PRMT1Q99873 361 aaKnown RBP11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 HEMGNQ9BXL5 484 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 CALN1Q9BXU9 219 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 KCND2Q9NZV8 630 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 THEGQ9P2T0 379 aa11.67□□□□□ -0.54
CDC42EP3-206ENST00000611976 WDR91A4D1P6 747 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 GIPC1O14908 333 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 SORBS3O60504 671 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 EPHA7Q15375 998 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 KLHDC7AQ5VTJ3 777 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 ERICH1Q86X53 443 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 ETNK1Q9HBU6 452 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 GPSM2P81274 684 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 MYO1EQ12965 1108 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 PSMD6Q15008 389 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 NXNQ6DKJ4 435 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 CASKIN2Q8WXE0 1202 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 LXNQ9BS40 222 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 MKNK1Q9BUB5 465 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 FAM129AQ9BZQ8 928 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 LACRTQ9GZZ8 138 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 WDR64B1ANS9 1081 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 F5H6K3 240 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 MAP2K7O14733 419 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 EIF3DO15371 548 aaKnown RBP eCLIP11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 PDHBP11177 359 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 HSD17B3P37058 310 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 KLRC3Q07444 240 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 ASPHQ12797 758 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 MTMR1Q13613 665 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 LRRC14Q15048 493 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 OR2W6PQ8NHA6 318 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 RIOK1Q9BRS2 568 aaKnown RBP11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 MSTO1Q9BUK6 570 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 ROPN1BQ9BZX4 212 aaPredicted RBP11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 ROPN1Q9HAT0 212 aaPredicted RBP11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 GINS2Q9Y248 185 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 GYG2O15488 501 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 KRT76Q01546 638 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 JAMLQ86YT9 394 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 MAML1Q92585 1016 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 IP6K2Q9UHH9 426 aa11.66□□□□□ -0.54
CDC42EP3-206ENST00000611976 A0A0G2JND7 137 aa11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 ADRA2BP18089 450 aa11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 SLC9A1P19634 815 aa11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 ITIH2P19823 946 aa11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 TBXAS1P24557 533 aaPredicted RBP11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 QARSP47897 775 aaKnown RBP11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 GRB10Q13322 594 aa11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 MTERF2Q49AM1 385 aa11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 CEP120Q8N960 986 aa11.65□□□□□ -0.54
CDC42EP3-206ENST00000611976 ERP44Q9BS26 406 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms