RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MXD4Q14582 209 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-217ENST00000611848 NCAPHQ15003 741 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 KIZQ2M2Z5 673 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 HABP4Q5JVS0 413 aaKnown RBP9.76□□□□□ -0.85
SMAD4-217ENST00000611848 NT5DC1Q5TFE4 455 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 PADI6Q6TGC4 694 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 CCDC186Q7Z3E2 898 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 ZNF410Q86VK4 478 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 RHPN2Q8IUC4 686 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 CNNM3Q8NE01 707 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 MCPH1Q8NEM0 835 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 FAM212AQ96EL1 285 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 PNMA5Q96PV4 448 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 OSMRQ99650 979 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 FTHL17Q9BXU8 183 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 INO80BQ9C086 356 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-217ENST00000611848 CSRNP2Q9H175 543 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 BHMT2Q9H2M3 363 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 ADAMTS10Q9H324 1103 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 CDHR5Q9HBB8 845 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 XPNPEP1Q9NQW7 623 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 COL4A3BPQ9Y5P4 624 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 SLC4A7Q9Y6M7 1214 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 MYH11P35749 1972 aa9.76□□□□□ -0.85
SMAD4-217ENST00000611848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 ZBBXA8MT70 800 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 E9PMD0 336 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 GPR182O15218 404 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 USO1O60763 962 aaKnown RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 RPS6KA5O75582 802 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 CYP11B2P19099 503 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 ARL2P36404 184 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 KCNJ6P48051 423 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 SARSP49591 514 aaKnown RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 PAK2Q13177 524 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 PNOCQ13519 176 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 TMEM119Q4V9L6 283 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 DRC7Q8IY82 874 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 RASSF8Q8NHQ8 419 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 PHOSPHO2Q8TCD6 241 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 NLRP7Q8WX94 980 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 TMEM143Q96AN5 459 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 SCLT1Q96NL6 688 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 PPP1R16BQ96T49 567 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 SLC9A7Q96T83 725 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 GCOM2Q9BZD3 368 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 OSBPL7Q9BZF2 842 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 AGO3Q9H9G7 860 aaKnown RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 BMP2KQ9NSY1 1161 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 CXXC1Q9P0U4 656 aaPredicted RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 HOOK1Q9UJC3 728 aaKnown RBP9.75□□□□□ -0.85
SMAD4-217ENST00000611848 PADI3Q9ULW8 664 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 PYCARDQ9ULZ3 195 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 TTC3P53804 2025 aa9.75□□□□□ -0.85
SMAD4-217ENST00000611848 BIN1O00499 593 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 DARSP14868 501 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 CD52P31358 61 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 POU5F1BQ06416 359 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 LAMTOR4Q0VGL1 99 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 TFDP1Q14186 410 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 KARSQ15046 597 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 SPECC1Q5M775 1068 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 SYT2Q8N9I0 419 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 TMEM40Q8WWA1 233 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 PRPF31Q8WWY3 499 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 SYMPKQ92797 1274 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 EPSTI1Q96J88 318 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 KCND2Q9NZV8 630 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 NOC2LQ9Y3T9 749 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 PCDHA5Q9Y5H7 936 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 A0A087WZ62 844 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 POLR2DO15514 142 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 ACTN4O43707 911 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 TPM2P07951 284 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 PLA2G4BP0C869 781 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 WDR5P61964 334 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 TPM4P67936 248 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 SMAD3P84022 425 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 NFX1Q12986 1120 aaKnown RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 POSTNQ15063 836 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 TCTN1Q2MV58 587 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 FAM102BQ5T8I3 360 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 RINT1Q6NUQ1 792 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 USP49Q70CQ1 688 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 KCNK18Q7Z418 384 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 SRGAP1Q7Z6B7 1085 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 FAM228AQ86W67 206 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 SPATA20Q8TB22 786 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 KIFAP3Q92845 792 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 ZNF668Q96K58 619 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 NLRP4Q96MN2 994 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 PLIN2Q99541 437 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 FDXACB1Q9BRP7 624 aaPredicted RBP9.74□□□□□ -0.85
SMAD4-217ENST00000611848 TIPINQ9BVW5 301 aa9.74□□□□□ -0.85
SMAD4-217ENST00000611848 POLR3FQ9H1D9 316 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms