RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 MYBL2P10244 700 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 YWHABP31946 246 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 MYBPC2Q14324 1141 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 TTC31Q49AM3 519 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 LRRC15Q8TF66 581 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ATG4CQ96DT6 458 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ATP6V1G3Q96LB4 118 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 CBWD1Q9BRT8 395 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 PAGR1Q9BTK6 254 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 FBXL5Q9UKA1 691 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 INTUQ9ULD6 942 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 DIS3Q9Y2L1 958 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 ZSCAN5CA6NGD5 496 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 CTNND1O60716 968 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 GUCY2CP25092 1073 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 IRAK1P51617 712 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ZBTB8OSQ8IWT0 167 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 KCTD10Q9H3F6 313 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 NFIBO00712 420 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ZBTB39O15060 712 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 ICAM1P05362 532 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 PLS3P13797 630 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 CNGA1P29973 690 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 GBP2P32456 591 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 FKBP1AP62942 108 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 SLMAPQ14BN4 828 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 SHROOM1Q2M3G4 852 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 SGO2Q562F6 1265 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 INPP4AQ96PE3 977 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 C11orf70Q9BRQ4 267 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 SUCLA2Q9P2R7 463 aaPredicted RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 GTF3C4Q9UKN8 822 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 IKBKGQ9Y6K9 419 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 TMEM191BP0C7N4 346 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 MTMR2Q13614 643 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 SNRNP35Q16560 246 aaKnown RBP6.87□□□□□ -1.31
SNX13-213ENST00000611725 METTL13Q8N6R0 699 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 GINS2Q9Y248 185 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 CSADQ9Y600 493 aa6.87□□□□□ -1.31
SNX13-213ENST00000611725 DDX3XO00571 662 aaKnown RBP eCLIP6.86□□□□□ -1.313e-18■■■□□ 15.2
SNX13-213ENST00000611725 TTI1O43156 1089 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 CYP26A1O43174 497 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 CHRNA3P32297 505 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 MEI1Q5TIA1 1274 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 FKBP1CQ5VVH2 108 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 SWSAP1Q6NVH7 229 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 DPH6Q7L8W6 267 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 CBWD2Q8IUF1 395 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 CACNA2D3Q8IZS8 1091 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 SLC35G2Q8TBE7 412 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ATP6V0A4Q9HBG4 840 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 FRMPD4Q14CM0 1322 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 F8VZ95 297 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 TULP2O00295 520 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 NKRFO15226 690 aaKnown RBP eCLIP6.86□□□□□ -1.31
SNX13-213ENST00000611725 ARSHQ5FYA8 562 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 C1orf186Q6ZWK4 172 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 TAOK1Q7L7X3 1001 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 DNAAF5Q86Y56 855 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 TPCN2Q8NHX9 752 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 FAM213AQ9BRX8 229 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 KIAA1586Q9HCI6 787 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 PIK3CDO00329 1044 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 PSMD10O75832 226 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 DPEP1P16444 411 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ITGB5P18084 799 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 IBSPP21815 317 aaPredicted RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 RARRES1P49788 294 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 MARSP56192 900 aaKnown RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 KCTD2Q14681 263 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 SH3BP5LQ7L8J4 393 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 SYTL5Q8TDW5 730 aaPredicted RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 SLC5A5Q92911 643 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 TAAR1Q96RJ0 339 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ADAM22Q9P0K1 906 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 PTPN22Q9Y2R2 807 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 PODXLO00592 558 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 RASGRF2O14827 1237 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ONECUT3O60422 494 aaPredicted RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 SLCO1A2P46721 670 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 IFNAR2P48551 515 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 BMT2Q1RMZ1 405 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 SUPT20HL1Q3ZLR7 823 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 XKR3Q5GH77 459 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ARMC9Q7Z3E5 817 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 FAM83AQ86UY5 434 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ZNF564Q8TBZ8 553 aaPredicted RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 ARL8AQ96BM9 186 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ZIM3Q96PE6 472 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 UNC45AQ9H3U1 944 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ANAPC7Q9UJX3 599 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ZNF148Q9UQR1 794 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 INO80B-WBP1J3KQ70 363 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 TGFB1I1O43294 461 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 KRT19P08727 400 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 ATP5DP30049 168 aa6.86□□□□□ -1.31
SNX13-213ENST00000611725 POLR2BP30876 1174 aaKnown RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 CLK2P49760 499 aaKnown RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 AENQ8WTP8 325 aaKnown RBP6.86□□□□□ -1.31
SNX13-213ENST00000611725 GRK7Q8WTQ7 553 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms