RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 KLHDC7AQ5VTJ3 777 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 SLFN12LQ6IEE8 588 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 PRR5LQ6MZQ0 368 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 DDX42Q86XP3 938 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDH1-212ENST00000611625 VGLL2Q8N8G2 317 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 SAAL1Q96ER3 474 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 RBM41Q96IZ5 413 aaKnown RBP13.31□□□□□ -0.28
CDH1-212ENST00000611625 GBP5Q96PP8 586 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 NBPF3Q9H094 633 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 TTLL3Q9Y4R7 772 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 RICTORQ6R327 1708 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 KRT76Q01546 638 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 HAUS6Q7Z4H7 955 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 PASD1Q8IV76 773 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 TRIM42Q8IWZ5 723 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 FAM213AQ9BRX8 229 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 MAPK13O15264 365 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 RPA1P27694 616 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 RCN2Q14257 317 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 ARHGAP27Q6ZUM4 889 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 ZBTB33Q86T24 672 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 AFAP1L2Q8N4X5 818 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 GABPB2Q8TAK5 448 aaPredicted RBP13.31□□□□□ -0.28
CDH1-212ENST00000611625 CDKL2Q92772 493 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 ISCUQ9H1K1 167 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 NYAP2Q9P242 653 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 ARHGAP20Q9P2F6 1191 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 CLEC11AQ9Y240 323 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 SPATA31A1Q5TZJ5 1347 aa13.31□□□□□ -0.28
CDH1-212ENST00000611625 THOC1Q96FV9 657 aaKnown RBP13.3□□□□□ -0.28
CDH1-212ENST00000611625 KIAA1586Q9HCI6 787 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 PABPN1LA6NDY0 278 aaKnown RBP13.3□□□□□ -0.28
CDH1-212ENST00000611625 MED7O43513 233 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 ACTN3Q08043 901 aaPredicted RBP13.3□□□□□ -0.28
CDH1-212ENST00000611625 DARS2Q6PI48 645 aaKnown RBP13.3□□□□□ -0.28
CDH1-212ENST00000611625 SCARA5Q6ZMJ2 495 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 ERICH1Q86X53 443 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 SMC1BQ8NDV3 1235 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 C1orf54Q8WWF1 131 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 NOP53Q9NZM5 478 aaKnown RBP13.3□□□□□ -0.28
CDH1-212ENST00000611625 RIMS1Q86UR5 1692 aaKnown RBP13.3□□□□□ -0.28
CDH1-212ENST00000611625 A6NJR5 290 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 FGFR4P22455 802 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 PEX19P40855 299 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 CORO7P57737 925 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 LRRC14Q15048 493 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 TMEM270Q6UE05 265 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 LRRC31Q6UY01 552 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 PDCD7Q8N8D1 485 aaKnown RBP13.3□□□□□ -0.28
CDH1-212ENST00000611625 KCTD6Q8NC69 237 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 RTN2O75298 545 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 IGBP1P78318 339 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 NR1H3Q13133 447 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 MAP3K21Q5TCX8 1036 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 KRT27Q7Z3Y8 459 aa13.3□□□□□ -0.28
CDH1-212ENST00000611625 RNF25Q96BH1 459 aaPredicted RBP13.3□□□□□ -0.28
CDH1-212ENST00000611625 LDHAP00338 332 aaKnown RBP13.29□□□□□ -0.28
CDH1-212ENST00000611625 CPP00450 1065 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 CYP11B2P19099 503 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 SEC24CP53992 1094 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 PDE1BQ01064 536 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 TAF11Q15544 211 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 FBXW10Q5XX13 1052 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 EPM2AIP1Q7L775 607 aaPredicted RBP13.29□□□□□ -0.28
CDH1-212ENST00000611625 CCDC125Q86Z20 511 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 FBXL13Q8NEE6 735 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 RAB3IL1Q8TBN0 382 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 ATP6V0A4Q9HBG4 840 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 RAVER2Q9HCJ3 691 aaKnown RBP13.29□□□□□ -0.28
CDH1-212ENST00000611625 GINM1Q9NU53 330 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 CYP26A1O43174 497 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 TFRCP02786 760 aaKnown RBP13.29□□□□□ -0.28
CDH1-212ENST00000611625 DRP2Q13474 957 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 AGBL2Q5U5Z8 902 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 TMEM35BQ8NCS4 154 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 TTC7AQ9ULT0 858 aaPredicted RBP13.29□□□□□ -0.28
CDH1-212ENST00000611625 TMEM253P0C7T8 217 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 IRX4P78413 519 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 EZH2Q15910 746 aaKnown RBP13.29□□□□□ -0.28
CDH1-212ENST00000611625 ZNF394Q53GI3 561 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 SNF8Q96H20 258 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 KLC4Q9NSK0 619 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 BCAP29Q9UHQ4 241 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 NAGPAQ9UK23 515 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 PRDM4Q9UKN5 801 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 PHF2O75151 1096 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 DCTN3O75935 186 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 SLC12A2P55011 1212 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 OSTNP61366 133 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 PSMC5P62195 406 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 CDC42EP5Q6NZY7 148 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
CDH1-212ENST00000611625 SUCLA2Q9P2R7 463 aaPredicted RBP13.29□□□□□ -0.28
CDH1-212ENST00000611625 LRRC10BA6NIK2 292 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 AGTP01019 485 aa13.28□□□□□ -0.28
CDH1-212ENST00000611625 PSMA2P25787 234 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms