RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 JPH2Q9BR39 696 aaPredicted RBP27.34■■□□□ 1.97
CDKN3-211ENST00000611205 TRAIPQ9BWF2 469 aa27.34■■□□□ 1.97
CDKN3-211ENST00000611205 ZBP1Q9H171 429 aa27.34■■□□□ 1.97
CDKN3-211ENST00000611205 ADAM7Q9H2U9 754 aa27.34■■□□□ 1.97
CDKN3-211ENST00000611205 POMKQ9H5K3 350 aa27.34■■□□□ 1.97
CDKN3-211ENST00000611205 TBC1D13Q9NVG8 400 aa27.34■■□□□ 1.97
CDKN3-211ENST00000611205 WDFY4Q6ZS81 3184 aa27.34■■□□□ 1.97
CDKN3-211ENST00000611205 ZDBF2Q9HCK1 2354 aa27.33■■□□□ 1.97
CDKN3-211ENST00000611205 MEIS3P2A8K0S8 358 aa27.33■■□□□ 1.97
CDKN3-211ENST00000611205 RNASELQ05823 741 aaKnown RBP27.33■■□□□ 1.97
CDKN3-211ENST00000611205 ITIH3Q06033 890 aa27.33■■□□□ 1.97
CDKN3-211ENST00000611205 RSPH1Q8WYR4 309 aa27.33■■□□□ 1.97
CDKN3-211ENST00000611205 NECTIN4Q96NY8 510 aa27.33■■□□□ 1.97
CDKN3-211ENST00000611205 PRRX2Q99811 253 aa27.33■■□□□ 1.97
CDKN3-211ENST00000611205 GBP3Q9H0R5 595 aa27.33■■□□□ 1.97
CDKN3-211ENST00000611205 NRDE2Q9H7Z3 1164 aa27.33■■□□□ 1.97
CDKN3-211ENST00000611205 CCDC194A0A1B0GVG4 234 aa27.32■■□□□ 1.96
CDKN3-211ENST00000611205 WEE2P0C1S8 567 aa27.32■■□□□ 1.96
CDKN3-211ENST00000611205 RAB27AP51159 221 aa27.32■■□□□ 1.96
CDKN3-211ENST00000611205 NPEPPSP55786 919 aa27.32■■□□□ 1.96
CDKN3-211ENST00000611205 NOMO2Q5JPE7 1267 aa27.32■■□□□ 1.96
CDKN3-211ENST00000611205 RARS2Q5T160 578 aaKnown RBP27.32■■□□□ 1.96
CDKN3-211ENST00000611205 FAM177A1Q8N128 213 aaPredicted RBP27.32■■□□□ 1.96
CDKN3-211ENST00000611205 IGSF21Q96ID5 467 aa27.32■■□□□ 1.96
CDKN3-211ENST00000611205 CYP26B1Q9NR63 512 aa27.32■■□□□ 1.96
CDKN3-211ENST00000611205 ARID2Q68CP9 1835 aa27.32■■□□□ 1.96
CDKN3-211ENST00000611205 QARSP47897 775 aaKnown RBP27.31■■□□□ 1.96
CDKN3-211ENST00000611205 VCPP55072 806 aaKnown RBP27.31■■□□□ 1.96
CDKN3-211ENST00000611205 C12orf76Q8N812 135 aaPredicted RBP27.31■■□□□ 1.96
CDKN3-211ENST00000611205 SLC7A3Q8WY07 619 aa27.31■■□□□ 1.96
CDKN3-211ENST00000611205 PDRG1Q9NUG6 133 aa27.31■■□□□ 1.96
CDKN3-211ENST00000611205 COL4A3BPQ9Y5P4 624 aa27.31■■□□□ 1.96
CDKN3-211ENST00000611205 CARNS1A5YM72 827 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 C2CD4DB7Z1M9 353 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 EPB41L2O43491 1005 aaKnown RBP27.3■■□□□ 1.96
CDKN3-211ENST00000611205 DKC1O60832 514 aaKnown RBP eCLIP27.3■■□□□ 1.96
CDKN3-211ENST00000611205 OFD1O75665 1012 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 GALTP07902 379 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 CTSAP10619 480 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 MTHFRP42898 656 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 POLGP54098 1239 aaPredicted RBP27.3■■□□□ 1.96
CDKN3-211ENST00000611205 PPP2R5CQ13362 524 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 DDX53Q86TM3 631 aaKnown RBP27.3■■□□□ 1.96
CDKN3-211ENST00000611205 KREMEN2Q8NCW0 462 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 BCL7CQ8WUZ0 217 aaPredicted RBP27.3■■□□□ 1.96
CDKN3-211ENST00000611205 PGBD4Q96DM1 585 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 CEP170P1Q96L14 293 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 RIPOR3Q96MK2 946 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 TM6SF1Q9BZW5 370 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 IFT122Q9HBG6 1241 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 BMP2KQ9NSY1 1161 aaPredicted RBP27.3■■□□□ 1.96
CDKN3-211ENST00000611205 DNAJB4Q9UDY4 337 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 VAV3Q9UKW4 847 aa27.3■■□□□ 1.96
CDKN3-211ENST00000611205 ZNF623O75123 536 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 EPCAMP16422 314 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 TCF15Q12870 199 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 GIT2Q14161 759 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 KANK3Q6NY19 840 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 NEK8Q86SG6 692 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 ZNF579Q8NAF0 562 aaKnown RBP27.29■■□□□ 1.96
CDKN3-211ENST00000611205 TMEM143Q96AN5 459 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 PHF20Q9BVI0 1012 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 AGPAT5Q9NUQ2 364 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 DZANK1Q9NVP4 752 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 PCDHB2Q9Y5E7 798 aa27.29■■□□□ 1.96
CDKN3-211ENST00000611205 MARCH6O60337 910 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 CCNT1O60563 726 aaKnown RBP27.28■■□□□ 1.96
CDKN3-211ENST00000611205 SRGAP2CP0DJJ0 459 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 AVPR2P30518 371 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 SLC11A1P49279 550 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 ZNF280BQ86YH2 543 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 URGCPQ8TCY9 931 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 FAM20AQ96MK3 541 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 KCNMB3Q9NPA1 279 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 WRAP73Q9P2S5 460 aaPredicted RBP27.28■■□□□ 1.96
CDKN3-211ENST00000611205 SORCS3Q9UPU3 1222 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 IRAK3Q9Y616 596 aa27.28■■□□□ 1.96
CDKN3-211ENST00000611205 CDKL5O76039 1030 aa27.27■■□□□ 1.96
CDKN3-211ENST00000611205 PDGFBP01127 241 aaPredicted RBP27.27■■□□□ 1.96
CDKN3-211ENST00000611205 P4HBP07237 508 aaKnown RBP27.27■■□□□ 1.96
CDKN3-211ENST00000611205 SCRN1Q12765 414 aa27.27■■□□□ 1.96
CDKN3-211ENST00000611205 MTMR3Q13615 1198 aa27.27■■□□□ 1.96
CDKN3-211ENST00000611205 PRPF31Q8WWY3 499 aaKnown RBP27.27■■□□□ 1.96
CDKN3-211ENST00000611205 PSPC1Q8WXF1 523 aaKnown RBP27.27■■□□□ 1.96
CDKN3-211ENST00000611205 DBR1Q9UK59 544 aaKnown RBP27.27■■□□□ 1.96
CDKN3-211ENST00000611205 DENND4AQ7Z401 1863 aa27.27■■□□□ 1.96
CDKN3-211ENST00000611205 DTNBO60941 627 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 GCFC2P16383 781 aaKnown RBP27.26■■□□□ 1.95
CDKN3-211ENST00000611205 XBP1P17861 261 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 ATAT1Q5SQI0 421 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 PPP4R3AQ6IN85 833 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 KIAA1841Q6NSI8 718 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 AGMOQ6ZNB7 445 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 PIK3AP1Q6ZUJ8 805 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 SRGAP1Q7Z6B7 1085 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 EXOC8Q8IYI6 725 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 TDRD5Q8NAT2 981 aaKnown RBP27.26■■□□□ 1.95
CDKN3-211ENST00000611205 FAM193BQ96PV7 902 aaPredicted RBP27.26■■□□□ 1.95
CDKN3-211ENST00000611205 LXNQ9BS40 222 aa27.26■■□□□ 1.95
CDKN3-211ENST00000611205 DHX33Q9H6R0 707 aaKnown RBP27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms