RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ZBTB46Q86UZ6 589 aa5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 REXO1L1PQ8IX06 675 aa5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 Q8TCH9 128 aa5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 TGFBRAP1Q8WUH2 860 aa5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 RPGRQ92834 1020 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 FUBP3Q96I24 572 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 OR10A5Q9H207 317 aa5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 THRAP3Q9Y2W1 955 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 PPP2R3BQ9Y5P8 575 aa5.76□□□□□ -1.49
SMCHD1-213ENST00000609587 WDR33Q9C0J8 1336 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 PRSS38A1L453 326 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 CUTAO60888 179 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 H2AFYO75367 372 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 CFBP00751 764 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 ENPP1P22413 925 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 GPR3P46089 330 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 EPHB1P54762 984 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 BCAR1P56945 870 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 NOLC1Q14978 699 aaKnown RBP eCLIP5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 UGT8Q16880 541 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 MIIPQ5JXC2 388 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 KANSL1Q7Z3B3 1105 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 KBTBD2Q8IY47 623 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 AMOTL1Q8IY63 956 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 C1orf162Q8NEQ5 155 aaPredicted RBP5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 CHMP4CQ96CF2 233 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 WNT8AQ9H1J5 351 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 JADE2Q9NQC1 790 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 AASDHPPTQ9NRN7 309 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 MKS1Q9NXB0 559 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 FBXO10Q9UK96 956 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 ZDHHC9Q9Y397 364 aa5.75□□□□□ -1.49
SMCHD1-213ENST00000609587 MAFGO15525 162 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 CCND1P24385 295 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 CSF2RBP32927 897 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 CD83Q01151 205 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 MCL1Q07820 350 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 TOP3AQ13472 1001 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 CLUL1Q15846 466 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 WDR72Q3MJ13 1102 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 UNQ6494/PRO21346Q6UXR6 183 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 RNF207Q6ZRF8 634 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 EAF2Q96CJ1 260 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 FAXDC2Q96IV6 333 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 ORAI2Q96SN7 254 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 IKZF4Q9H2S9 585 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 WDR26Q9H7D7 661 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 CCM2LQ9NUG4 571 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 MYPNQ86TC9 1320 aa5.74□□□□□ -1.49
SMCHD1-213ENST00000609587 TRIM75PA6NK02 468 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 MAFO75444 373 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 ZNF202O95125 648 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 LPLP06858 475 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 RBP3P10745 1247 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 PURAQ00577 322 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 ABHD18Q0P651 414 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 FOXE3Q13461 319 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 PCBP2Q15366 365 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 PITRM1Q5JRX3 1037 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 KANK2Q63ZY3 851 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 PNMA8AQ86V59 439 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 RAVER1Q8IY67 606 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 HOOK2Q96ED9 719 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 CARD11Q9BXL7 1154 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 MTG2Q9H4K7 406 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 DNAJC28Q9NX36 388 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 TCEAL9Q9UHQ7 104 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 DENND2AQ9ULE3 1009 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 EDARQ9UNE0 448 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 MRFAP1Q9Y605 127 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 EID1Q9Y6B2 187 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 NUMBLQ9Y6R0 609 aa5.73□□□□□ -1.49
SMCHD1-213ENST00000609587 FZD9O00144 591 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 B4GALT4O60513 344 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 PCDH8O95206 1070 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 PFKMP08237 780 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 ADCY8P40145 1251 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 ETV4P43268 484 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 MAP3K12Q12852 859 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 USP10Q14694 798 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 TOR2AQ5JU69 321 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 GRAMD4Q6IC98 578 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 RALYLQ86SE5 291 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 RSAD2Q8WXG1 361 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 ZNF503Q96F45 646 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 RAX2Q96IS3 184 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 SLC13A1Q9BZW2 595 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 PITHD1Q9GZP4 211 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 KCTD10Q9H3F6 313 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 KCMF1Q9P0J7 381 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 TNFRSF18Q9Y5U5 241 aa5.72□□□□□ -1.49
SMCHD1-213ENST00000609587 A0A0A6YYJ9 748 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 KLHL33A6NCF5 533 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 AKAP10O43572 662 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 XPOTO43592 962 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 OPHN1O60890 802 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 SNUPNO95149 360 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms