RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 DNAJB1P25685 340 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 FXR2P51116 673 aaKnown RBP eCLIP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 DNM1Q05193 864 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 LRRC74AQ0VAA2 488 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CLUL1Q15846 466 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 EZH2Q15910 746 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 KLHL38Q2WGJ6 581 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ALFQ53S48 1182 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 BRDTQ58F21 947 aaPredicted RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CLVS2Q5SYC1 327 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 C6orf163Q5TEZ5 329 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 MAEAQ7L5Y9 396 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CROCCP3Q8IVE0 287 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CCDC116Q8IYX3 515 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PI4K2BQ8TCG2 481 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PANK1Q8TE04 598 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 DNAJC9Q8WXX5 260 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ARL8AQ96BM9 186 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 OTUD5Q96G74 571 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ZNF287Q9HBT7 754 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 AVENQ9NQS1 362 aaPredicted RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 KCND1Q9NSA2 647 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ETNK2Q9NVF9 386 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 UCKL1Q9NWZ5 548 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 RBMX2Q9Y388 322 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PCDHGB3Q9Y5G1 929 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 STON1Q9Y6Q2 735 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 VWA3AA6NCI4 1184 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 GOLGA8SH3BPF8 625 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CHMP2AO43633 222 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 DKC1O60832 514 aaKnown RBP eCLIP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PPP1R37O75864 691 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 DDX58O95786 925 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 KRT5P13647 590 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ATP6V1C1P21283 382 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 LSP1P33241 339 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 VBP1P61758 197 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CYP4A11Q02928 519 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 DNAJC3Q13217 504 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 LSAMPQ13449 338 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 LAPTM5Q13571 262 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 C21orf62-AS1Q17RA5 79 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ESCO1Q5FWF5 840 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 E4F1Q66K89 784 aaPredicted RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 METTL3Q86U44 580 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 AKAP14Q86UN6 197 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 FERMT3Q86UX7 667 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 LRRC47Q8N1G4 583 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PRPF31Q8WWY3 499 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 RIN2Q8WYP3 895 aaPredicted RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 MRPS27Q92552 414 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PMEPA1Q969W9 287 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 SAMD11Q96NU1 681 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CRNKL1Q9BZJ0 848 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 DNAJC25Q9H1X3 360 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 MOCS1Q9NZB8 636 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ZNF624Q9P2J8 865 aaPredicted RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 MALT1Q9UDY8 824 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 VTI1BQ9UEU0 232 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 RAB21Q9UL25 225 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PCDHB13Q9Y5F0 798 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PARP3Q9Y6F1 533 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PTCH1Q13635 1447 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 KRBA1A5PL33 1030 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 E7ENQ6 273 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 RAD51BO15315 384 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CCNT1O60563 726 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 FGAP02671 866 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CTNNA1P35221 906 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 RAD23BP54727 409 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 RAB15P59190 212 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 MYL6P60660 151 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CCZ1BP86790 482 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CCZ1P86791 482 aaPredicted RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PLIN5Q00G26 463 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 FKBP4Q02790 459 aaKnown RBP eCLIP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 TMEM266Q2M3C6 531 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 SMU1Q2TAY7 513 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ANO4Q32M45 955 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 MYLK3Q32MK0 819 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 EAPPQ56P03 285 aaPredicted RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 SH3D19Q5HYK7 790 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PDXDC2PQ6P474 469 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 FAM122CQ6P4D5 195 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 SLC4A10Q6U841 1118 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 LRRTM3Q86VH5 581 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PALM2Q8IXS6 379 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 SYTL1Q8IYJ3 562 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 COG1Q8WTW3 980 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 ALKBH8Q96BT7 664 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 SDCCAG3Q96C92 435 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 CEP19Q96LK0 163 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 MARCH7Q9H992 704 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 STARD7Q9NQZ5 370 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 USP40Q9NVE5 1235 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 DDX18Q9NVP1 670 aaKnown RBP5.06□□□□□ -1.6
HDDC2-208ENST00000609021 STMN3Q9NZ72 180 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 NDUFA13Q9P0J0 144 aa5.06□□□□□ -1.6
HDDC2-208ENST00000609021 PCDHB6Q9Y5E3 794 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms