RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 SCUBE2Q9NQ36 999 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 UBIAD1Q9Y5Z9 338 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 CEP295Q9C0D2 2601 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 RALGAPA1Q6GYQ0 2036 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 MIA3Q5JRA6 1907 aa10.58□□□□□ -0.72
CTCFL-220ENST00000608858 LAMA4Q16363 1823 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 A0A0U1RQF3 1178 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 HBP1O60381 514 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 B4GALT3O60512 393 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 LILRB3O75022 631 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 PCP11498 1178 aaKnown RBP10.57□□□□□ -0.72
CTCFL-220ENST00000608858 MX1P20591 662 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 ATP4AP20648 1035 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 TARSP26639 723 aaKnown RBP10.57□□□□□ -0.72
CTCFL-220ENST00000608858 CLCN3P51790 818 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 NTHL1P78549 312 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 RING1Q06587 406 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 TRAF1Q13077 416 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 SIM2Q14190 667 aaPredicted RBP10.57□□□□□ -0.72
CTCFL-220ENST00000608858 UBE2SQ16763 222 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 SWSAP1Q6NVH7 229 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
CTCFL-220ENST00000608858 NELL1Q92832 810 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 ZNF707Q96C28 371 aaPredicted RBP10.57□□□□□ -0.72
CTCFL-220ENST00000608858 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 BORCS6Q96GS4 357 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 NT5C3AQ9H0P0 336 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 LTB4R2Q9NPC1 389 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 JADE2Q9NQC1 790 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 MRPL17Q9NRX2 175 aaKnown RBP10.57□□□□□ -0.72
CTCFL-220ENST00000608858 RXFP3Q9NSD7 469 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 TBC1D13Q9NVG8 400 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.57□□□□□ -0.72
CTCFL-220ENST00000608858 AKT3Q9Y243 479 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 SDK1Q7Z5N4 2213 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 DOCK6Q96HP0 2047 aa10.57□□□□□ -0.72
CTCFL-220ENST00000608858 ZBTB42B2RXF5 422 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 AXIN1O15169 862 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 TEX28O15482 410 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 HRO43593 1189 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 GAS2O43903 313 aaKnown RBP10.56□□□□□ -0.72
CTCFL-220ENST00000608858 DDHD2O94830 711 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 TOP3BO95985 862 aaKnown RBP10.56□□□□□ -0.72
CTCFL-220ENST00000608858 RETP07949 1114 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 AFF1P51825 1210 aaKnown RBP10.56□□□□□ -0.72
CTCFL-220ENST00000608858 SF3A2Q15428 464 aaKnown RBP10.56□□□□□ -0.72
CTCFL-220ENST00000608858 CSRP2Q16527 193 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 LAIR1Q6GTX8 287 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 PDXDC2PQ6P474 469 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 UNQ6494/PRO21346Q6UXR6 183 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 TPRG1Q6ZUI0 275 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 CYB5R4Q7L1T6 521 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 LRRC71Q8N4P6 559 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 PHKBQ93100 1093 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 KXD1Q9BQD3 176 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 SDF4Q9BRK5 362 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 DDX23Q9BUQ8 820 aaKnown RBP10.56□□□□□ -0.72
CTCFL-220ENST00000608858 KCNH7Q9NS40 1196 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 FAM217BQ9NTX9 383 aaPredicted RBP10.56□□□□□ -0.72
CTCFL-220ENST00000608858 NDRG2Q9UN36 371 aaKnown RBP10.56□□□□□ -0.72
CTCFL-220ENST00000608858 LHX6Q9UPM6 363 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 GCN1Q92616 2671 aaKnown RBP10.56□□□□□ -0.72
CTCFL-220ENST00000608858 DOCK8Q8NF50 2099 aa10.56□□□□□ -0.72
CTCFL-220ENST00000608858 hCG_1642624A0A1W2PR95 340 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 SRRM3A6NNA2 597 aaPredicted RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 OFD1O75665 1012 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 ALDH2P05091 517 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 EIF4BP23588 611 aaKnown RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 FSHRP23945 695 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 HOXC13P31276 330 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 SHC2P98077 582 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 ITGB3BPQ13352 177 aaPredicted RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 FZD5Q13467 585 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 GRM4Q14833 912 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 SEC23AQ15436 765 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 AASDHQ4L235 1098 aaPredicted RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 NOMO2Q5JPE7 1267 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 ZNF484Q5JVG2 852 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 EFCAB12Q6NXP0 572 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 GRASPQ7Z6J2 395 aaPredicted RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 CMTR1Q8N1G2 835 aaKnown RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 CELF5Q8N6W0 485 aaKnown RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 CMASQ8NFW8 434 aaPredicted RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 RILPL2Q969X0 211 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 B3GALT6Q96L58 329 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 SCLT1Q96NL6 688 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 MRPL9Q9BYD2 267 aaKnown RBP10.55□□□□□ -0.72
CTCFL-220ENST00000608858 ADAMTS10Q9H324 1103 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 PSTPIP2Q9H939 334 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 PCDHA6Q9UN73 950 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 FAN1Q9Y2M0 1017 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 PCDHA8Q9Y5H6 950 aa10.55□□□□□ -0.72
CTCFL-220ENST00000608858 NBEAQ8NFP9 2946 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 CHURC1-FNTBB4DL54 471 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 C22orf31O95567 290 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 CCNE2O96020 404 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 GLUD1P00367 558 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 FNTBP49356 437 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 PSEN1P49768 467 aa10.54□□□□□ -0.72
CTCFL-220ENST00000608858 PRKCQQ04759 706 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms