RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 OGFRQ9NZT2 677 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 DDX25Q9UHL0 483 aaKnown RBP11.67□□□□□ -0.54
LINC01001-203ENST00000607448 NFE2L3Q9Y4A8 694 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 PRRC2BQ5JSZ5 2229 aaKnown RBP11.67□□□□□ -0.54
LINC01001-203ENST00000607448 FNDC1Q4ZHG4 1894 aaPredicted RBP11.67□□□□□ -0.54
LINC01001-203ENST00000607448 CCDC194A0A1B0GVG4 234 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 SMIM35A0A1B0GVV1 85 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 LINC01553A4QN01 128 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 WDR64B1ANS9 1081 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 STX10O60499 249 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 UPP2O95045 317 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 C22orf31O95567 290 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 IGFBP4P22692 258 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 CD52P31358 61 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 GRIN1Q05586 938 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 SPECC1Q5M775 1068 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 TTC38Q5R3I4 469 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 SPATA1Q5VX52 437 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 SPECC1LQ69YQ0 1117 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 MOXD1Q6UVY6 613 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 TMEM40Q8WWA1 233 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
LINC01001-203ENST00000607448 ARNTL2Q8WYA1 636 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 GAS2L1Q99501 681 aaPredicted RBP11.67□□□□□ -0.54
LINC01001-203ENST00000607448 SH2D3AQ9BRG2 576 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 ZBED2Q9BTP6 218 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 MTUS1Q9ULD2 1270 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 COL1A2P08123 1366 aa11.67□□□□□ -0.54
LINC01001-203ENST00000607448 CCNT1O60563 726 aaKnown RBP11.66□□□□□ -0.54
LINC01001-203ENST00000607448 EFCAB14O75071 495 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 AMHP03971 560 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 ATP2C1P98194 919 aaPredicted RBP11.66□□□□□ -0.54
LINC01001-203ENST00000607448 PRKCEQ02156 737 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 CCDC85BQ15834 202 aaPredicted RBP11.66□□□□□ -0.54
LINC01001-203ENST00000607448 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 TSHZ1Q6ZSZ6 1077 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 RSPH3Q86UC2 560 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 POTEDQ86YR6 584 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC01001-203ENST00000607448 KIAA0319LQ8IZA0 1049 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 HAS1Q92839 578 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 TOP1MTQ969P6 601 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 KCNMB3Q9NPA1 279 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 TCEAL9Q9UHQ7 104 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 TRPV2Q9Y5S1 764 aa11.66□□□□□ -0.54
LINC01001-203ENST00000607448 A0A1B0GTH6 734 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 EML1O00423 815 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 LPXNO60711 386 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 STBD1O95210 358 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 OATP04181 439 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 ATP2B1P20020 1258 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 CLCN3P51790 818 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 HTRA4P83105 476 aaPredicted RBP11.65□□□□□ -0.54
LINC01001-203ENST00000607448 ZNF484Q5JVG2 852 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 ARL6IP4Q66PJ3 421 aaKnown RBP11.65□□□□□ -0.54
LINC01001-203ENST00000607448 PPP4R3AQ6IN85 833 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 SYT10Q6XYQ8 523 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 MIER3Q7Z3K6 550 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 RTN4RL1Q86UN2 441 aaPredicted RBP11.65□□□□□ -0.54
LINC01001-203ENST00000607448 BANK1Q8NDB2 785 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 GDPD5Q8WTR4 605 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 APBB2Q92870 758 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 DHX58Q96C10 678 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 PAGE5Q96GU1 130 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 RAD9AQ99638 391 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 BAG1Q99933 345 aaPredicted RBP11.65□□□□□ -0.54
LINC01001-203ENST00000607448 CELF4Q9BZC1 486 aaKnown RBP11.65□□□□□ -0.54
LINC01001-203ENST00000607448 INTS13Q9NVM9 706 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 VAV3Q9UKW4 847 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 GINS2Q9Y248 185 aa11.65□□□□□ -0.54
LINC01001-203ENST00000607448 PLXNA4Q9HCM2 1894 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 VTNP04004 478 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 TPM1P09493 284 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 SFNP31947 248 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 JAK3P52333 1124 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 DPYDQ12882 1025 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 NR1I3Q14994 352 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 KIZQ2M2Z5 673 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 FILIP1LQ4L180 1135 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 IER5Q5VY09 327 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 TMEM139Q8IV31 216 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 LRRC71Q8N4P6 559 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 LINC01465Q8N7H1 131 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 PDILTQ8N807 584 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 IQUBQ8NA54 791 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 SP7Q8TDD2 431 aaPredicted RBP11.64□□□□□ -0.55
LINC01001-203ENST00000607448 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
LINC01001-203ENST00000607448 ZNF668Q96K58 619 aaPredicted RBP11.64□□□□□ -0.55
LINC01001-203ENST00000607448 PANX2Q96RD6 677 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 C17orf80Q9BSJ5 609 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 NAA15Q9BXJ9 866 aaKnown RBP11.64□□□□□ -0.55
LINC01001-203ENST00000607448 RMND1Q9NWS8 449 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 WRAP73Q9P2S5 460 aaPredicted RBP11.64□□□□□ -0.55
LINC01001-203ENST00000607448 PADI3Q9ULW8 664 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 NOC2LQ9Y3T9 749 aaKnown RBP11.64□□□□□ -0.55
LINC01001-203ENST00000607448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01001-203ENST00000607448 KDM3AQ9Y4C1 1321 aa11.64□□□□□ -0.55
LINC01001-203ENST00000607448 ENPP3O14638 875 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms