RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 H3BQV1 296 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 LINC01565O15544 149 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 TSPAN1O60635 241 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 KCNA5P22460 613 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 CDC25AP30304 524 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 HOXA11P31270 313 aaPredicted RBP13.67□□□□□ -0.22
CTSA-210ENST00000606000 CCT6AP40227 531 aaKnown RBP13.67□□□□□ -0.22
CTSA-210ENST00000606000 MBTD1Q05BQ5 628 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 HYAL1Q12794 435 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 SRGAP1Q7Z6B7 1085 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 EXOC8Q8IYI6 725 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 THNSL1Q8IYQ7 743 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 ABI1Q8IZP0 508 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 LRRC43Q8N309 656 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 ERMNQ8TAM6 284 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 BSNDQ8WZ55 320 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 LMAN2LQ9H0V9 348 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 POLD4Q9HCU8 107 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 CHST12Q9NRB3 414 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 LRWD1Q9UFC0 647 aa13.67□□□□□ -0.22
CTSA-210ENST00000606000 SPTBN5Q9NRC6 3674 aaKnown RBP13.66□□□□□ -0.22
CTSA-210ENST00000606000 INO80B-WBP1J3KQ70 363 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 B4GALT5O43286 388 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 HOXA2O43364 376 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 B4GALT3O60512 393 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 FGF18O76093 207 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 EOMESO95936 686 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 LAG3P18627 525 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 AFF1P51825 1210 aaKnown RBP13.66□□□□□ -0.22
CTSA-210ENST00000606000 PTENP60484 403 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 CUL4AQ13619 759 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 AMHR2Q16671 573 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 FAM43BQ6ZT52 329 aaPredicted RBP13.66□□□□□ -0.22
CTSA-210ENST00000606000 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
CTSA-210ENST00000606000 IGSF22Q8N9C0 903 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 SNX29Q8TEQ0 813 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 SYMPKQ92797 1274 aaKnown RBP13.66□□□□□ -0.22
CTSA-210ENST00000606000 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 EIF2AQ9BY44 585 aaKnown RBP13.66□□□□□ -0.22
CTSA-210ENST00000606000 IGFLR1Q9H665 355 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 CLDND1Q9NY35 253 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 DBR1Q9UK59 544 aaKnown RBP13.66□□□□□ -0.22
CTSA-210ENST00000606000 INPP5FQ9Y2H2 1132 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.66□□□□□ -0.22
CTSA-210ENST00000606000 PCDHB2Q9Y5E7 798 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 PCDHB12Q9Y5F1 795 aa13.66□□□□□ -0.22
CTSA-210ENST00000606000 VCANP13611 3396 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 ARHGEF35A5YM69 484 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 LRRIQ4A6NIV6 560 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 NT5C1B-RDH14C9J2C7 533 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 E9PMD0 336 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 ASAP2O43150 1006 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 ERLIN2O94905 339 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 XRCC6P12956 609 aaKnown RBP eCLIP13.65□□□□□ -0.22
CTSA-210ENST00000606000 ERVFC1P60507 584 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 DLX2Q07687 328 aaPredicted RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 TFDP1Q14186 410 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 MXD4Q14582 209 aaPredicted RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 NAALADL2Q58DX5 795 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 RILPL1Q5EBL4 403 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 LARP1BQ659C4 914 aaKnown RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 HAUS3Q68CZ6 603 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 PADI6Q6TGC4 694 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 KCNT2Q6UVM3 1135 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 AGMOQ6ZNB7 445 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 KCNK18Q7Z418 384 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 TMEM173Q86WV6 379 aaPredicted RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 PABPC5Q96DU9 382 aaKnown RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 UHRF1Q96T88 793 aaPredicted RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 MMTAG2Q9BU76 263 aaKnown RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 TRAIPQ9BWF2 469 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 BHMT2Q9H2M3 363 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 AAASQ9NRG9 546 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 DDX19AQ9NUU7 478 aaKnown RBP13.65□□□□□ -0.22
CTSA-210ENST00000606000 KIAA1024Q9UPX6 916 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 USP20Q9Y2K6 914 aa13.65□□□□□ -0.22
CTSA-210ENST00000606000 TTLL13PA6NNM8 815 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 TBX10O75333 385 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 OFD1O75665 1012 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 EDN1P05305 212 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 IL9P15248 144 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 ARF4P18085 180 aaPredicted RBP13.64□□□□□ -0.23
CTSA-210ENST00000606000 LTBRP36941 435 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 RAB27AP51159 221 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
CTSA-210ENST00000606000 ATP2C1P98194 919 aaPredicted RBP13.64□□□□□ -0.23
CTSA-210ENST00000606000 COL19A1Q14993 1142 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 CLUL1Q15846 466 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 RBM23Q86U06 439 aaKnown RBP13.64□□□□□ -0.23
CTSA-210ENST00000606000 SMG8Q8ND04 991 aaKnown RBP13.64□□□□□ -0.23
CTSA-210ENST00000606000 ZNF558Q96NG5 402 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 KIFC3Q9BVG8 833 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 TBC1D13Q9NVG8 400 aa13.64□□□□□ -0.23
CTSA-210ENST00000606000 HES2Q9Y543 173 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms