RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KIF9Q9HAQ2 790 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 FANCLQ9NW38 375 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 RNF14Q9UBS8 474 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CTNNAL1Q9UBT7 734 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 HOOK1Q9UJC3 728 aaKnown RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CEP131Q9UPN4 1083 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 GNEQ9Y223 722 aaKnown RBP4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 PCDHB5Q9Y5E4 795 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 PCDHA11Q9Y5I1 949 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 SAR1BQ9Y6B6 198 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 LAMA4Q16363 1823 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 MED23Q9ULK4 1368 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 CAMSAP1Q5T5Y3 1602 aa4.5□□□□□ -1.69
HMGB1P50-201ENST00000605814 A0A1B0GVL5 298 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 SSU72P8A0A1W2PR75 194 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 EME2A4GXA9 379 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 GMNCA6NCL1 334 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 OR14I1A6ND48 311 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 ENO4A6NNW6 628 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 HMGB1P1B2RPK0 211 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 B4DLN1 442 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 TMEM232C9JQI7 657 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 STXBP3O00186 592 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 DNM1LO00429 736 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 PEX10O60683 326 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 TAF5LO75529 589 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 SURF6O75683 361 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 LUC7L3O95232 432 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 CTDNEP1O95476 244 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 NPTXRO95502 500 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 FAM163BP0C2L3 166 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 PLCG1P19174 1290 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCND1P24385 295 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 PAPOLAP51003 745 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 EPHB4P54760 987 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 KCNB1Q14721 858 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 NFIXQ14938 502 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 NAA25Q14CX7 972 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 RRS1Q15050 365 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 STK38Q15208 465 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 SGSM1Q2NKQ1 1148 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 ANKRD20A8PQ5CZ79 823 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 ADGRF1Q5T601 910 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 C1QTNF12Q5T7M4 302 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 TSHZ3Q63HK5 1081 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 SLC30A9Q6PML9 568 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 LRIG3Q6UXM1 1119 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCDC121Q6ZUS5 278 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 BZW1Q7L1Q6 419 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 G2E3Q7L622 706 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 APTXQ7Z2E3 356 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 PPP1R42Q7Z4L9 355 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 APBB1IPQ7Z5R6 666 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 SESTD1Q86VW0 696 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 PPFIBP1Q86W92 1011 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 MCATQ8IVS2 390 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 FAM177A1Q8N128 213 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 CLASRPQ8N2M8 674 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 ANKS4BQ8N8V4 417 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 DTWD2Q8NBA8 298 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 ATL2Q8NHH9 583 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 RASSF8Q8NHQ8 419 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 MYCBPAPQ8TBZ2 947 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 SMCR8Q8TEV9 937 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 CYB5D2Q8WUJ1 264 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 LZICQ8WZA0 190 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 CCT6BQ92526 530 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 PPP1R14BQ96C90 147 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 Q96M66 194 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 GPR62Q9BZJ7 368 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 DUSP15Q9H1R2 295 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 PLEKHA4Q9H4M7 779 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 KCNMB3Q9NPA1 279 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 ADAM30Q9UKF2 790 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 YBX2Q9Y2T7 364 aaKnown RBP4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 C15orf41Q9Y2V0 281 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 LRRC42Q9Y546 428 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 KCTD3Q9Y597 815 aa4.49□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZMYM6O95789 1325 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 NCAPD2Q15021 1401 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ZFYVE16Q7Z3T8 1539 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 GPR75-ASB3A0A0A6YYF3 556 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 TEX51A0A1B0GUA7 166 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 GOLGA6L10A6NI86 522 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 E7ENQ6 273 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 GFRA2O00451 464 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 PRPF3O43395 683 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 JAK2O60674 1132 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 HSF2BPO75031 334 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 MFAP3LO75121 409 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ANP32DO95626 131 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ATP6V1G2O95670 118 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 PENKP01210 267 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 VIMP08670 466 aaKnown RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 UBTFL1P0CB47 393 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 PFKFB1P16118 471 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 GNA15P30679 374 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 SYKP43405 635 aa4.48□□□□□ -1.69
HMGB1P50-201ENST00000605814 ADKP55263 362 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms