RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 CTC1Q2NKJ3 1217 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 MCTP1Q6DN14 999 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 OTUD6AQ7L8S5 288 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 CATSPER4Q7RTX7 472 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 CDR2LQ86X02 465 aaPredicted RBP11.88□□□□□ -0.51
TUBE1-210ENST00000604967 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
TUBE1-210ENST00000604967 DAW1Q8N136 415 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 VN1R2Q8NFZ6 395 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 ADAMTS19Q8TE59 1207 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 POF1BQ8WVV4 589 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 P2RX5Q93086 422 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 HLA-CQ95604 372 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 CPB2Q96IY4 423 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
TUBE1-210ENST00000604967 PLVAPQ9BX97 442 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 VN1R3Q9BXE9 311 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 CXCL16Q9H2A7 254 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 CHST12Q9NRB3 414 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 FAM105AQ9NUU6 356 aa11.88□□□□□ -0.51
TUBE1-210ENST00000604967 DBR1Q9UK59 544 aaKnown RBP11.88□□□□□ -0.51
TUBE1-210ENST00000604967 E9PMD0 336 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 H3BQ06 376 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-210ENST00000604967 ZNF623O75123 536 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 TBX10O75333 385 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 OFD1O75665 1012 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 DGAT1O75907 488 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 FGF18O76093 207 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 XRCC6P12956 609 aaKnown RBP eCLIP11.87□□□□□ -0.51
TUBE1-210ENST00000604967 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-210ENST00000604967 SFPQP23246 707 aaKnown RBP eCLIP11.87□□□□□ -0.51
TUBE1-210ENST00000604967 FAM173BQ6P4H8 233 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 PADI6Q6TGC4 694 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 SRGAP1Q7Z6B7 1085 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 MRPL10Q7Z7H8 261 aaKnown RBP11.87□□□□□ -0.51
TUBE1-210ENST00000604967 ZNF280BQ86YH2 543 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 FEZF2Q8TBJ5 459 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.51
TUBE1-210ENST00000604967 PNMA5Q96PV4 448 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 JPH2Q9BR39 696 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-210ENST00000604967 KIFC3Q9BVG8 833 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 UPF2Q9HAU5 1272 aaKnown RBP11.87□□□□□ -0.51
TUBE1-210ENST00000604967 KIAA1024Q9UPX6 916 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 SMC3Q9UQE7 1217 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 HES2Q9Y543 173 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 PCDHB2Q9Y5E7 798 aa11.87□□□□□ -0.51
TUBE1-210ENST00000604967 NT5C1B-RDH14C9J2C7 533 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 FSCN2O14926 492 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 DDHD2O94830 711 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 GLP2RO95838 553 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 EOMESO95936 686 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 ARF4P18085 180 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 KCNA5P22460 613 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 CCT6AP40227 531 aaKnown RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 MCM2P49736 904 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 CDC42EP1Q00587 391 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 POU5F1BQ06416 359 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 MAPK7Q13164 816 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 GNL2Q13823 731 aaKnown RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 ODR4Q5SWX8 454 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 LARP1BQ659C4 914 aaKnown RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 CDCA2Q69YH5 1023 aaPredicted RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 TWF2Q6IBS0 349 aaKnown RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 NACC1Q96RE7 527 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 RUSC1Q9BVN2 902 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 CCDC113Q9H0I3 377 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 LMAN2LQ9H0V9 348 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 NSUN3Q9H649 340 aaKnown RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 DDX19AQ9NUU7 478 aaKnown RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 TBC1D13Q9NVG8 400 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 MIOSQ9NXC5 875 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 DNAJB4Q9UDY4 337 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 LRWD1Q9UFC0 647 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 NOL7Q9UMY1 257 aaKnown RBP11.86□□□□□ -0.51
TUBE1-210ENST00000604967 COG5Q9UP83 839 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
TUBE1-210ENST00000604967 HIDE1A8MVS5 230 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 F8W810 466 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 GAS2O43903 313 aaKnown RBP11.85□□□□□ -0.51
TUBE1-210ENST00000604967 CYP11B2P19099 503 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 PRPHP41219 470 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 RESTQ13127 1097 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 PDIA5Q14554 519 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 PTPROQ16827 1216 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 TIGD5Q53EQ6 642 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 KCNT2Q6UVM3 1135 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 FAM43BQ6ZT52 329 aaPredicted RBP11.85□□□□□ -0.51
TUBE1-210ENST00000604967 TAS1R3Q7RTX0 852 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 SLC39A11Q8N1S5 342 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 GSTCDQ8NEC7 633 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 TCP11Q8WWU5 503 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 BHMT2Q9H2M3 363 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 NXF3Q9H4D5 531 aaKnown RBP11.85□□□□□ -0.51
TUBE1-210ENST00000604967 NRDE2Q9H7Z3 1164 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 CLEC1BQ9P126 229 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 IPPQ9Y573 584 aa11.85□□□□□ -0.51
TUBE1-210ENST00000604967 INO80B-WBP1J3KQ70 363 aa11.84□□□□□ -0.51
TUBE1-210ENST00000604967 PER2O15055 1255 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms