RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 GTF2F1P35269 517 aaKnown RBP eCLIP20.17■□□□□ 0.823e-7■■■□□ 14.9
CCDC12-208ENST00000603885 LTBRP36941 435 aa20.17■□□□□ 0.82
CCDC12-208ENST00000603885 TRAPPC10P48553 1259 aa20.17■□□□□ 0.82
CCDC12-208ENST00000603885 KCNT2Q6UVM3 1135 aa20.17■□□□□ 0.82
CCDC12-208ENST00000603885 ADGRD2Q7Z7M1 963 aa20.17■□□□□ 0.82
CCDC12-208ENST00000603885 TUFT1Q9NNX1 390 aa20.17■□□□□ 0.82
CCDC12-208ENST00000603885 PUF60Q9UHX1 559 aaKnown RBP20.17■□□□□ 0.82
CCDC12-208ENST00000603885 LZTS1Q9Y250 596 aa20.17■□□□□ 0.82
CCDC12-208ENST00000603885 KIF3AQ9Y496 699 aa20.17■□□□□ 0.82
CCDC12-208ENST00000603885 XRCC6P12956 609 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCDC12-208ENST00000603885 IL9P15248 144 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 TECP42680 631 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 RARRES1P49788 294 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 PLCB3Q01970 1234 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 TFDP1Q14186 410 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 PDE12Q6L8Q7 609 aaKnown RBP20.16■□□□□ 0.82
CCDC12-208ENST00000603885 GLB1LQ6UWU2 654 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 ERMNQ8TAM6 284 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 PIGOQ8TEQ8 1089 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 MRPS27Q92552 414 aaKnown RBP20.16■□□□□ 0.82
CCDC12-208ENST00000603885 MINDY3Q9H8M7 445 aa20.16■□□□□ 0.82
CCDC12-208ENST00000603885 ZNF623O75123 536 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 ERLIN2O94905 339 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 SPATA31C1P0DKV0 1188 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 NRIP1P48552 1158 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 KRT17Q04695 432 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 ADAM15Q13444 863 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 PCBP1Q15365 356 aaKnown RBP eCLIP20.15■□□□□ 0.82
CCDC12-208ENST00000603885 CATSPER3Q86XQ3 398 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 FAM178BQ8IXR5 827 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 EFHBQ8N7U6 833 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 LPPQ93052 612 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 PGBD4Q96DM1 585 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 POLR3CQ9BUI4 534 aaPredicted RBP20.15■□□□□ 0.82
CCDC12-208ENST00000603885 TLE6Q9H808 572 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 SPG21Q9NZD8 308 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 PCDHGC5Q9Y5F6 944 aa20.15■□□□□ 0.82
CCDC12-208ENST00000603885 LINC01565O15544 149 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 TBX10O75333 385 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 U2AF2P26368 475 aaKnown RBP eCLIP20.14■□□□□ 0.81
CCDC12-208ENST00000603885 PBX3P40426 434 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 NDUFV1P49821 464 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 PTENP60484 403 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 ERVFC1P60507 584 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 POU5F1BQ06416 359 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 DLX2Q07687 328 aaPredicted RBP20.14■□□□□ 0.81
CCDC12-208ENST00000603885 LONRF3Q496Y0 759 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 RBM23Q86U06 439 aaKnown RBP20.14■□□□□ 0.81
CCDC12-208ENST00000603885 PCDHB2Q9Y5E7 798 aa20.14■□□□□ 0.81
CCDC12-208ENST00000603885 A0A087WWV3 80 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 FSD2A1L4K1 749 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 INO80B-WBP1J3KQ70 363 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 FSCN2O14926 492 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 USO1O60763 962 aaKnown RBP20.13■□□□□ 0.81
CCDC12-208ENST00000603885 MED24O75448 989 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 HOXA11P31270 313 aaPredicted RBP20.13■□□□□ 0.81
CCDC12-208ENST00000603885 ARL2P36404 184 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 ALDH7A1P49419 539 aaKnown RBP20.13■□□□□ 0.81
CCDC12-208ENST00000603885 CAPSQ13938 189 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 CLUL1Q15846 466 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 NOMO2Q5JPE7 1267 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 HAUS3Q68CZ6 603 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 IFNLR1Q8IU57 520 aaPredicted RBP20.13■□□□□ 0.81
CCDC12-208ENST00000603885 SLC39A11Q8N1S5 342 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 ASAP3Q8TDY4 903 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 TMX3Q96JJ7 454 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 NACC1Q96RE7 527 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 ENTPD7Q9NQZ7 604 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 DBR1Q9UK59 544 aaKnown RBP20.13■□□□□ 0.81
CCDC12-208ENST00000603885 INPP5FQ9Y2H2 1132 aa20.13■□□□□ 0.81
CCDC12-208ENST00000603885 CARNS1A5YM72 827 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 MEIS3P2A8K0S8 358 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 RPA1P27694 616 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 AXLP30530 894 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 BCAR1P56945 870 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 NCBP1Q09161 790 aaKnown RBP20.12■□□□□ 0.81
CCDC12-208ENST00000603885 NBR1Q14596 966 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 PLPP4Q5VZY2 271 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 POTEGQ6S5H5 508 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 GJD3Q8N144 294 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 MCPH1Q8NEM0 835 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 CDCA3Q99618 268 aaPredicted RBP20.12■□□□□ 0.81
CCDC12-208ENST00000603885 TCF25Q9BQ70 676 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 POLR3FQ9H1D9 316 aaPredicted RBP20.12■□□□□ 0.81
CCDC12-208ENST00000603885 NGRNQ9NPE2 291 aaKnown RBP20.12■□□□□ 0.81
CCDC12-208ENST00000603885 TBC1D13Q9NVG8 400 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 CD207Q9UJ71 328 aa20.12■□□□□ 0.81
CCDC12-208ENST00000603885 CNTNAP2Q9UHC6 1331 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 TSPAN1O60635 241 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 ZC3H11AO75152 810 aaKnown RBP eCLIP20.11■□□□□ 0.81
CCDC12-208ENST00000603885 OFD1O75665 1012 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 GLRA2P23416 452 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 SSTR3P32745 418 aaPredicted RBP20.11■□□□□ 0.81
CCDC12-208ENST00000603885 MCM2P49736 904 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 FXR2P51116 673 aaKnown RBP eCLIP20.11■□□□□ 0.81
CCDC12-208ENST00000603885 RNASELQ05823 741 aaKnown RBP20.11■□□□□ 0.81
CCDC12-208ENST00000603885 SMAD4Q13485 552 aaKnown RBP20.11■□□□□ 0.81
CCDC12-208ENST00000603885 DUSP6Q16828 381 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 UBXN11Q5T124 520 aa20.11■□□□□ 0.81
CCDC12-208ENST00000603885 NOTUMQ6P988 496 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms