RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 NKD2Q969F2 451 aaPredicted RBP3.95□□□□□ -1.78
SGMS1-207ENST00000602619 MSL2Q9HCI7 577 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 KCMF1Q9P0J7 381 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 TMPRSS11EQ9UL52 423 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 VWA7Q9Y334 891 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 COL4A3BPQ9Y5P4 624 aa3.95□□□□□ -1.78
SGMS1-207ENST00000602619 A0A0G2JNJ9 132 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 ANKRD62A6NC57 917 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 ELL2O00472 640 aaPredicted RBP3.94□□□□□ -1.78
SGMS1-207ENST00000602619 PRPF6O94906 941 aaKnown RBP3.94□□□□□ -1.78
SGMS1-207ENST00000602619 CNGA1P29973 690 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 CDKN1CP49918 316 aaPredicted RBP3.94□□□□□ -1.78
SGMS1-207ENST00000602619 CD83Q01151 205 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 CCDC178Q5BJE1 867 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 ZBTB41Q5SVQ8 909 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 FRMD7Q6ZUT3 714 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 GPR155Q7Z3F1 870 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 CXorf67Q86X51 503 aaPredicted RBP3.94□□□□□ -1.78
SGMS1-207ENST00000602619 RPUSD2Q8IZ73 545 aaKnown RBP3.94□□□□□ -1.78
SGMS1-207ENST00000602619 OR5AN1Q8NGI8 311 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 WDR66Q8TBY9 1149 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 RSAD2Q8WXG1 361 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 NEIL1Q96FI4 390 aaPredicted RBP3.94□□□□□ -1.78
SGMS1-207ENST00000602619 POFUT1Q9H488 388 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 Q9UFV3 132 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 MSRAQ9UJ68 235 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 NUMBLQ9Y6R0 609 aa3.94□□□□□ -1.78
SGMS1-207ENST00000602619 PMS2P1A4D2B8 440 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 KDM1AO60341 852 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 OPHN1O60890 802 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 GPR15P49685 360 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 ADCY2Q08462 1091 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 TUBA3CQ13748 450 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 NFYCQ13952 458 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 PDCD1Q15116 288 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 INAVAQ3KP66 663 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 WDR72Q3MJ13 1102 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 TIGD7Q6NT04 549 aaPredicted RBP3.93□□□□□ -1.78
SGMS1-207ENST00000602619 TUBA3EQ6PEY2 450 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 ESPNLQ6ZVH7 1005 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 LYSMD2Q8IV50 215 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 ERCC4Q92889 916 aaPredicted RBP3.93□□□□□ -1.78
SGMS1-207ENST00000602619 TUBGCP5Q96RT8 1024 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 MYL10Q9BUA6 226 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 PUS7LQ9H0K6 701 aaKnown RBP3.93□□□□□ -1.78
SGMS1-207ENST00000602619 MS4A5Q9H3V2 200 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 TOPORSQ9NS56 1045 aaPredicted RBP3.93□□□□□ -1.78
SGMS1-207ENST00000602619 TYW1Q9NV66 732 aaKnown RBP3.93□□□□□ -1.78
SGMS1-207ENST00000602619 PTPN22Q9Y2R2 807 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 NOP58Q9Y2X3 529 aaKnown RBP3.93□□□□□ -1.78
SGMS1-207ENST00000602619 PPP2R3BQ9Y5P8 575 aa3.93□□□□□ -1.78
SGMS1-207ENST00000602619 A0A0A6YYK5 440 aaPredicted RBP3.92□□□□□ -1.78
SGMS1-207ENST00000602619 ALG1L2C9J202 215 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 RAD17O75943 681 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 PRKD3O94806 890 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 SEC24DO94855 1032 aaPredicted RBP3.92□□□□□ -1.78
SGMS1-207ENST00000602619 ADH4P08319 380 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 KRT4P19013 534 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 KRTAP10-9P60411 292 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 KRT85P78386 507 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 TMPRSS15P98073 1019 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 COL10A1Q03692 680 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 USP10Q14694 798 aaKnown RBP3.92□□□□□ -1.78
SGMS1-207ENST00000602619 NOLC1Q14978 699 aaKnown RBP eCLIP3.92□□□□□ -1.78
SGMS1-207ENST00000602619 FSCN1Q16658 493 aaKnown RBP3.92□□□□□ -1.78
SGMS1-207ENST00000602619 DGKDQ16760 1214 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 PRAMEF9Q5VWM5 478 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 MAMDC4Q6UXC1 1216 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 UNQ6494/PRO21346Q6UXR6 183 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 LARP4Q71RC2 724 aaKnown RBP eCLIP3.92□□□□□ -1.78
SGMS1-207ENST00000602619 IFNL2Q8IZJ0 200 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 PRPF38AQ8NAV1 312 aaKnown RBP3.92□□□□□ -1.78
SGMS1-207ENST00000602619 LMBR1Q8WVP7 490 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 RPGRQ92834 1020 aaKnown RBP3.92□□□□□ -1.78
SGMS1-207ENST00000602619 LPPQ93052 612 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 ACAP3Q96P50 834 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 SOX7Q9BT81 388 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 CARD11Q9BXL7 1154 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 OSBPL6Q9BZF3 934 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 MTG2Q9H4K7 406 aa3.92□□□□□ -1.78
SGMS1-207ENST00000602619 PRSS38A1L453 326 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 LCHNA4D1U4 455 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 TRIM75PA6NK02 468 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 MAFGO15525 162 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 EIF5BO60841 1220 aaKnown RBP3.91□□□□□ -1.78
SGMS1-207ENST00000602619 HMGCRP04035 888 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 ZNF888P0CJ79 500 aaPredicted RBP3.91□□□□□ -1.78
SGMS1-207ENST00000602619 NCLP19338 710 aaKnown RBP3.91□□□□□ -1.78
SGMS1-207ENST00000602619 MAKP20794 623 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 ENPP1P22413 925 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 SESN2P58004 480 aaPredicted RBP3.91□□□□□ -1.78
SGMS1-207ENST00000602619 ANTXR2P58335 489 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 HGFACQ04756 655 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 ZMAT1Q5H9K5 638 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 Q6ZPA2 131 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 CBARPQ8N350 705 aaPredicted RBP3.91□□□□□ -1.78
SGMS1-207ENST00000602619 VTA1Q9NP79 307 aa3.91□□□□□ -1.78
SGMS1-207ENST00000602619 POLR3BQ9NW08 1133 aaPredicted RBP3.91□□□□□ -1.78
SGMS1-207ENST00000602619 CTDP1Q9Y5B0 961 aaPredicted RBP3.91□□□□□ -1.78
SGMS1-207ENST00000602619 PCDHB6Q9Y5E3 794 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms