RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 RWDD3Q9Y3V2 267 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 MRPL42Q9Y6G3 142 aaKnown RBP18.54■□□□□ 0.56
SSBP4-213ENST00000602088 RALGAPA2Q2PPJ7 1873 aa18.54■□□□□ 0.56
SSBP4-213ENST00000602088 PRRC2BQ5JSZ5 2229 aaKnown RBP18.53■□□□□ 0.56
SSBP4-213ENST00000602088 LRRIQ4A6NIV6 560 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 TBKBP1A7MCY6 615 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 C5orf67F2Z3F1 127 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 H3BNC9 293 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 HOXA2O43364 376 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 GTPBP6O43824 516 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-213ENST00000602088 ZNF623O75123 536 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 ERLIN2O94905 339 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 ATF7P17544 494 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-213ENST00000602088 MARCKSP29966 332 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-213ENST00000602088 SLC39A14Q15043 492 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 AMHR2Q16671 573 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 TMEM119Q4V9L6 283 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 RINT1Q6NUQ1 792 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 KIFAP3Q92845 792 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 PLIN2Q99541 437 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 POLD4Q9HCU8 107 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 LMCD1Q9NZU5 365 aa18.53■□□□□ 0.56
SSBP4-213ENST00000602088 FBXO2Q9UK22 296 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-213ENST00000602088 SRPRBQ9Y5M8 271 aaKnown RBP18.53■□□□□ 0.56
SSBP4-213ENST00000602088 MORC2Q9Y6X9 1032 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-213ENST00000602088 COL4A4P53420 1690 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-213ENST00000602088 TSPAN1O60635 241 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 RB1P06400 928 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-213ENST00000602088 SKIP12755 728 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 AXLP30530 894 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 CTNNB1P35222 781 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 RAB27AP51159 221 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
SSBP4-213ENST00000602088 GPM6BQ13491 265 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 CDCA2Q69YH5 1023 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-213ENST00000602088 C1orf186Q6ZWK4 172 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 SYT2Q8N9I0 419 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-213ENST00000602088 RNF169Q8NCN4 708 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 BSNDQ8WZ55 320 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 CALML4Q96GE6 196 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 CASD1Q96PB1 797 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 TMEM117Q9H0C3 514 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 FAM105AQ9NUU6 356 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 UNC80Q8N2C7 3258 aa18.52■□□□□ 0.56
SSBP4-213ENST00000602088 NAMPTP43490 491 aa18.51■□□□□ 0.55
SSBP4-213ENST00000602088 NASPP49321 788 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-213ENST00000602088 PPP2R5AQ15172 486 aa18.51■□□□□ 0.55
SSBP4-213ENST00000602088 UBXN11Q5T124 520 aa18.51■□□□□ 0.55
SSBP4-213ENST00000602088 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-213ENST00000602088 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-213ENST00000602088 PPM1EQ8WY54 764 aa18.51■□□□□ 0.55
SSBP4-213ENST00000602088 RUSC1Q9BVN2 902 aa18.51■□□□□ 0.55
SSBP4-213ENST00000602088 PLVAPQ9BX97 442 aa18.51■□□□□ 0.55
SSBP4-213ENST00000602088 CSRNP2Q9H175 543 aa18.51■□□□□ 0.55
SSBP4-213ENST00000602088 C2orf40Q9H1Z8 148 aa18.51■□□□□ 0.55
SSBP4-213ENST00000602088 F13A1P00488 732 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 PLA2G4BP0C869 781 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 GUCY2CP25092 1073 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 SLC12A3P55017 1021 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 KARSQ15046 597 aaKnown RBP18.5■□□□□ 0.55
SSBP4-213ENST00000602088 CCDC85BQ15834 202 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-213ENST00000602088 CLLU1OSQ5K130 101 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 NOTUMQ6P988 496 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 MRPL10Q7Z7H8 261 aaKnown RBP18.5■□□□□ 0.55
SSBP4-213ENST00000602088 ZBTB8OSQ8IWT0 167 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 ABI1Q8IZP0 508 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 DAW1Q8N136 415 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 P2RX5Q93086 422 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 CPB2Q96IY4 423 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 EPSTI1Q96J88 318 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 IFT74Q96LB3 600 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-213ENST00000602088 C11orf84Q9BUA3 381 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-213ENST00000602088 TIPINQ9BVW5 301 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 CCSER1Q9C0I3 900 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 FZD8Q9H461 694 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 CWH43Q9H720 699 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 TYW1Q9NV66 732 aaKnown RBP18.5■□□□□ 0.55
SSBP4-213ENST00000602088 PCDHB2Q9Y5E7 798 aa18.5■□□□□ 0.55
SSBP4-213ENST00000602088 KIAA1671Q9BY89 1806 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 B4GALT5O43286 388 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 HIP1RO75146 1068 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 SSBP05455 408 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSBP4-213ENST00000602088 ARF4P18085 180 aaPredicted RBP18.49■□□□□ 0.55
SSBP4-213ENST00000602088 MAPK7Q13164 816 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 PKP1Q13835 747 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 FAM187BQ17R55 369 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 LONRF3Q496Y0 759 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 NAALADL2Q58DX5 795 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 SPECC1Q5M775 1068 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 LRRC55Q6ZSA7 311 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 USP49Q70CQ1 688 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 MICALL1Q8N3F8 863 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 LINC00301Q8NCQ3 95 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 DEPTORQ8TB45 409 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 HELQQ8TDG4 1101 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 LRRC15Q8TF66 581 aa18.49■□□□□ 0.55
SSBP4-213ENST00000602088 LPPQ93052 612 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms