RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PCBP1Q15365 356 aaKnown RBP eCLIP19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 DDX53Q86TM3 631 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 PPFIBP1Q86W92 1011 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 UBALD2Q8IYN6 164 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 SLC7A3Q8WY07 619 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 RIPOR3Q96MK2 946 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 FDXACB1Q9BRP7 624 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 KANSL3Q9P2N6 904 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 HCFC2Q9Y5Z7 792 aa19.98■□□□□ 0.79
SHKBP1-227ENST00000602011 TDP2O95551 362 aa19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 P4HBP07237 508 aaKnown RBP19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 OTUD6AQ7L8S5 288 aa19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 CATSPER4Q7RTX7 472 aa19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 SRGAP1Q7Z6B7 1085 aa19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 RHPN2Q8IUC4 686 aa19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 ZNF668Q96K58 619 aaPredicted RBP19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 FAM105AQ9NUU6 356 aa19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 CACNA1HO95180 2353 aa19.97■□□□□ 0.79
SHKBP1-227ENST00000602011 CCDC194A0A1B0GVG4 234 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 CLASP2O75122 1294 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 CTSAP10619 480 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 RFC5P40937 340 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 DRP2Q13474 957 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 NOMO2Q5JPE7 1267 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 ATAT1Q5SQI0 421 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 ANO5Q75V66 913 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 ZBTB33Q86T24 672 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 VPS52Q8N1B4 723 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 PLCD3Q8N3E9 789 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 CNNM3Q8NE01 707 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 UBN1Q9NPG3 1134 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 CYP26B1Q9NR63 512 aa19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 PIN4Q9Y237 131 aaKnown RBP19.96■□□□□ 0.79
SHKBP1-227ENST00000602011 FGFR4P22455 802 aa19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 RNASELQ05823 741 aaKnown RBP19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 NEK8Q86SG6 692 aa19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 URGCPQ8TCY9 931 aa19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 TCP11Q8WWU5 503 aa19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 IGSF21Q96ID5 467 aa19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 SLKQ9H2G2 1235 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 USTQ9Y2C2 406 aa19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 CNTNAP2Q9UHC6 1331 aa19.95■□□□□ 0.78
SHKBP1-227ENST00000602011 ZFHX2Q9C0A1 2572 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 MARCH6O60337 910 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 ZC3H11AO75152 810 aaKnown RBP eCLIP19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 OFD1O75665 1012 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 ALDH2P05091 517 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 GALTP07902 379 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 AVPR2P30518 371 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 NCBP1Q09161 790 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 EPHA7Q15375 998 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 NPY5RQ15761 445 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 INF2Q27J81 1249 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 LETM2Q2VYF4 491 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 MRPL10Q7Z7H8 261 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 C4orf19Q8IY42 314 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 PSPC1Q8WXF1 523 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 WASF1Q92558 559 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 GJA10Q969M2 543 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 PHF20Q9BVI0 1012 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 ZBP1Q9H171 429 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 SMOC2Q9H3U7 446 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 KCNMB3Q9NPA1 279 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 TSHZ2Q9NRE2 1034 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 PDRG1Q9NUG6 133 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 AGPAT5Q9NUQ2 364 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 TBC1D13Q9NVG8 400 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 SORCS3Q9UPU3 1222 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 SSX2IPQ9Y2D8 614 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 COL4A3BPQ9Y5P4 624 aa19.94■□□□□ 0.78
SHKBP1-227ENST00000602011 CFAP54Q96N23 3096 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 CSDE1O75534 798 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 BAG4O95429 457 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 MTMR3Q13615 1198 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 SLFN12Q8IYM2 578 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 ZDHHC14Q8IZN3 488 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 CEP170P1Q96L14 293 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 NLRP4Q96MN2 994 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 TMEM175Q9BSA9 504 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 EMILIN2Q9BXX0 1053 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 DHX33Q9H6R0 707 aaKnown RBP19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 NRDE2Q9H7Z3 1164 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 IFT122Q9HBG6 1241 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 DPP7Q9UHL4 492 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 PCDHB2Q9Y5E7 798 aa19.93■□□□□ 0.78
SHKBP1-227ENST00000602011 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 NT5C1B-RDH14C9J2C7 533 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 H0Y858 1186 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 WEE2P0C1S8 567 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 AXLP30530 894 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 POU5F1BQ06416 359 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 KIAA1841Q6NSI8 718 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 FAM193BQ96PV7 902 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 ZSWIM4Q9H7M6 989 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 VAV3Q9UKW4 847 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 STK36Q9NRP7 1315 aa19.92■□□□□ 0.78
SHKBP1-227ENST00000602011 GFRA3O60609 400 aa19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 CA8P35219 290 aa19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 MXD4Q14582 209 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-227ENST00000602011 ANKRD1Q15327 319 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms