RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 NRDE2Q9H7Z3 1164 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 TBC1D13Q9NVG8 400 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 PIN4Q9Y237 131 aaKnown RBP20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 STK36Q9NRP7 1315 aa20.17■□□□□ 0.82
CHMP2A-208ENST00000601220 TBX3O15119 743 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 B4GALT3O60512 393 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 P4HBP07237 508 aaKnown RBP20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 GALTP07902 379 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 SKIP12755 728 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 HOXA11P31270 313 aaPredicted RBP20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 SPIRE1Q08AE8 756 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 IER5LQ5T953 404 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 MRPL10Q7Z7H8 261 aaKnown RBP20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 PBXIP1Q96AQ6 731 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 IGSF21Q96ID5 467 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 NLRP4Q96MN2 994 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 JPH2Q9BR39 696 aaPredicted RBP20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 ADAM7Q9H2U9 754 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 MINDY3Q9H8M7 445 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 COL4A3BPQ9Y5P4 624 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 IRAK3Q9Y616 596 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 WDFY4Q6ZS81 3184 aa20.16■□□□□ 0.82
CHMP2A-208ENST00000601220 CCDC194A0A1B0GVG4 234 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 CDKL5O76039 1030 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 CXCL14O95715 111 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 GCFC2P16383 781 aaKnown RBP20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 SIGLEC14Q08ET2 396 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 EPHA7Q15375 998 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 NOMO2Q5JPE7 1267 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 UBXN11Q5T124 520 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 AGMOQ6ZNB7 445 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 CATSPER4Q7RTX7 472 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 DDX53Q86TM3 631 aaKnown RBP20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 C4orf19Q8IY42 314 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 VPS52Q8N1B4 723 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 PRSS33Q8NF86 280 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 PRPF31Q8WWY3 499 aaKnown RBP20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 AUTS2Q8WXX7 1259 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 TMEM143Q96AN5 459 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 TMEM169Q96HH4 297 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 VN1R3Q9BXE9 311 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 AGPAT5Q9NUQ2 364 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 RGL1Q9NZL6 768 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 PPME1Q9Y570 386 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 PCDHB2Q9Y5E7 798 aa20.15■□□□□ 0.82
CHMP2A-208ENST00000601220 ZBTB39O15060 712 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 CCNT1O60563 726 aaKnown RBP20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 ZC3H11AO75152 810 aaKnown RBP eCLIP20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 CTSAP10619 480 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 FDPSP14324 419 aaKnown RBP20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 RAB27AP51159 221 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 AFF1P51825 1210 aaKnown RBP20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 POLGP54098 1239 aaPredicted RBP20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 PTPN21Q16825 1174 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 GLB1LQ6UWU2 654 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 PIK3AP1Q6ZUJ8 805 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 ZNF280BQ86YH2 543 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 SLC22A17Q8WUG5 538 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 TNFRSF25Q93038 417 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 CEP170P1Q96L14 293 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 SLKQ9H2G2 1235 aaPredicted RBP20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 DNAJB4Q9UDY4 337 aa20.14■□□□□ 0.81
CHMP2A-208ENST00000601220 FAM205CA6NFA0 338 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 DKC1O60832 514 aaKnown RBP eCLIP20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 SLC11A1P49279 550 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 MRE11P49959 708 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 ITIH3Q06033 890 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 LAMTOR4Q0VGL1 99 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 TPRNQ4KMQ1 711 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 SRGAP1Q7Z6B7 1085 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 SLC7A3Q8WY07 619 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 LXNQ9BS40 222 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 POMKQ9H5K3 350 aa20.13■□□□□ 0.81
CHMP2A-208ENST00000601220 DDHD2O94830 711 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 SLITRK3O94933 977 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 SRGAP2CP0DJJ0 459 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 YWHABP31946 246 aaKnown RBP20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 RFC5P40937 340 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 KANK3Q6NY19 840 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 EXOC8Q8IYI6 725 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 FBXL6Q8N531 539 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 C12orf76Q8N812 135 aaPredicted RBP20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 FEZF2Q8TBJ5 459 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 DYDC2Q96IM9 177 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 INPP5FQ9Y2H2 1132 aa20.12■□□□□ 0.81
CHMP2A-208ENST00000601220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 CARNS1A5YM72 827 aa20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 LILRB3O75022 631 aa20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 EPCAMP16422 314 aa20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 XBP1P17861 261 aa20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 SP100P23497 879 aaPredicted RBP20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 NR5A1Q13285 461 aa20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 CTTNQ14247 550 aaKnown RBP20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 FERMT3Q86UX7 667 aa20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 PSPC1Q8WXF1 523 aaKnown RBP20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 PGBD4Q96DM1 585 aa20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 NECTIN4Q96NY8 510 aa20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 NAP1L4Q99733 375 aaKnown RBP20.11■□□□□ 0.81
CHMP2A-208ENST00000601220 XPNPEP1Q9NQW7 623 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms