RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 STK38Q15208 465 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 KIZQ2M2Z5 673 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 FAM160B1Q5W0V3 765 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 ADALQ6DHV7 355 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 MIS18BP1Q6P0N0 1132 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 CATSPER3Q86XQ3 398 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 NME8Q8N427 588 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 KRI1Q8N9T8 703 aaKnown RBP9.77□□□□□ -0.85
TRIM28-214ENST00000600840 KCNG4Q8TDN1 519 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 ASIC4Q96FT7 647 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 EPSTI1Q96J88 318 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 AK8Q96MA6 479 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 PNMA5Q96PV4 448 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 CEP89Q96ST8 783 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 OSMRQ99650 979 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 EIF2AK1Q9BQI3 630 aaKnown RBP9.77□□□□□ -0.85
TRIM28-214ENST00000600840 POLR3CQ9BUI4 534 aaPredicted RBP9.77□□□□□ -0.85
TRIM28-214ENST00000600840 CCSER1Q9C0I3 900 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 SCAND2PQ9GZW5 306 aaPredicted RBP9.77□□□□□ -0.85
TRIM28-214ENST00000600840 RGL1Q9NZL6 768 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 PCDHGC5Q9Y5F6 944 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 PCDHA10Q9Y5I2 948 aa9.77□□□□□ -0.85
TRIM28-214ENST00000600840 A0A087X0B3 334 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 TMEM150BA6NC51 233 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 PRR23AA6NEV1 266 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 WDR64B1ANS9 1081 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 LOC730098B7Z3J9 87 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 M0QZ92 97 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 ITGB1P05556 798 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 RPA1P27694 616 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 JAK3P52333 1124 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 ZNF484Q5JVG2 852 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 SPECC1Q5M775 1068 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 FAM102BQ5T8I3 360 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 ADGRD2Q7Z7M1 963 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 FAM228AQ86W67 206 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 NPAS4Q8IUM7 802 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 LRRC71Q8N4P6 559 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 LINC01465Q8N7H1 131 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 SPPL3Q8TCT6 385 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 BBXQ8WY36 941 aaPredicted RBP9.76□□□□□ -0.85
TRIM28-214ENST00000600840 DYDC2Q96IM9 177 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 MSLNLQ96KJ4 702 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 SPATA32Q96LK8 384 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 ADAM2Q99965 735 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 SH2D3AQ9BRG2 576 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 LRWD1Q9UFC0 647 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 ST3GAL5Q9UNP4 418 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 PLAGL2Q9UPG8 496 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 HPSEQ9Y251 543 aa9.76□□□□□ -0.85
TRIM28-214ENST00000600840 COL1A2P08123 1366 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 A0A1W2PQ27 194 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 A0A1W2PQ64 194 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 A0A1W2PQD8 194 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 C9IYK1 514 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 ZBTB39O15060 712 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 CHMP2AO43633 222 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 GADD45BO75293 160 aaPredicted RBP9.75□□□□□ -0.85
TRIM28-214ENST00000600840 RPS6KA5O75582 802 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 KRT37O76014 449 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 RB1P06400 928 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 P4HBP07237 508 aaKnown RBP9.75□□□□□ -0.85
TRIM28-214ENST00000600840 PSAPP07602 524 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 MUTP22033 750 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 FGFR4P22455 802 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 CMA1P23946 247 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 ID4P47928 161 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 NDUFV1P49821 464 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 SIGLEC14Q08ET2 396 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 DRP2Q13474 957 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 DSC3Q14574 896 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 TARBP2Q15633 366 aaKnown RBP9.75□□□□□ -0.85
TRIM28-214ENST00000600840 E2F4Q16254 413 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 TMEM119Q4V9L6 283 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 NAALADL2Q58DX5 795 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 RESP18Q5W5W9 173 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 NCAPH2Q6IBW4 605 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 EFCAB12Q6NXP0 572 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 ERMP1Q7Z2K6 904 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 MIER3Q7Z3K6 550 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 KCNK18Q7Z418 384 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 C4orf19Q8IY42 314 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 CMTR2Q8IYT2 770 aaKnown RBP9.75□□□□□ -0.85
TRIM28-214ENST00000600840 METTL13Q8N6R0 699 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 KLHL23Q8NBE8 558 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 ENGASEQ8NFI3 743 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 C11orf84Q9BUA3 381 aaPredicted RBP9.75□□□□□ -0.85
TRIM28-214ENST00000600840 FTHL17Q9BXU8 183 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 ADAMTS10Q9H324 1103 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 TUFT1Q9NNX1 390 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 LMBRD1Q9NUN5 540 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 RNF19AQ9NV58 838 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 CLEC1BQ9P126 229 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 SAMM50Q9Y512 469 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 TCHHQ07283 1943 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 CFAP54Q96N23 3096 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 CACNA1AO00555 2505 aa9.75□□□□□ -0.85
TRIM28-214ENST00000600840 MED19A0JLT2 244 aaPredicted RBP9.74□□□□□ -0.85
TRIM28-214ENST00000600840 PROB1E7EW31 1015 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms