RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 EPHX3Q9H6B9 360 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 NGRNQ9NPE2 291 aaKnown RBP17.64■□□□□ 0.41
VRK3-221ENST00000600284 SH2B1Q9NRF2 756 aaPredicted RBP17.64■□□□□ 0.41
VRK3-221ENST00000600284 SPG21Q9NZD8 308 aa17.64■□□□□ 0.41
VRK3-221ENST00000600284 C19orf67A6NJJ6 358 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 TXKP42681 527 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 HMGN5P82970 282 aaKnown RBP17.63■□□□□ 0.41
VRK3-221ENST00000600284 ZP2Q05996 745 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 POU5F1BQ06416 359 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 COASYQ13057 564 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 ORC2Q13416 577 aaPredicted RBP17.63■□□□□ 0.41
VRK3-221ENST00000600284 MXD4Q14582 209 aaPredicted RBP17.63■□□□□ 0.41
VRK3-221ENST00000600284 RBM23Q86U06 439 aaKnown RBP17.63■□□□□ 0.41
VRK3-221ENST00000600284 FERMT3Q86UX7 667 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 PGBD4Q96DM1 585 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 C8orf76Q96K31 380 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 POP1Q99575 1024 aaKnown RBP17.63■□□□□ 0.41
VRK3-221ENST00000600284 AGPAT5Q9NUQ2 364 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 FAM105AQ9NUU6 356 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 CLEC1BQ9P126 229 aa17.63■□□□□ 0.41
VRK3-221ENST00000600284 ZBTB39O15060 712 aa17.62■□□□□ 0.41
VRK3-221ENST00000600284 GPR37L1O60883 481 aa17.62■□□□□ 0.41
VRK3-221ENST00000600284 DGAT1O75907 488 aa17.62■□□□□ 0.41
VRK3-221ENST00000600284 SRGAP2CP0DJJ0 459 aa17.62■□□□□ 0.41
VRK3-221ENST00000600284 COL9A1P20849 921 aa17.62■□□□□ 0.41
VRK3-221ENST00000600284 ALDH7A1P49419 539 aaKnown RBP17.62■□□□□ 0.41
VRK3-221ENST00000600284 DUSP6Q16828 381 aa17.62■□□□□ 0.41
VRK3-221ENST00000600284 SLC39A11Q8N1S5 342 aa17.62■□□□□ 0.41
VRK3-221ENST00000600284 KHSRPQ92945 711 aaKnown RBP eCLIP17.62■□□□□ 0.41
VRK3-221ENST00000600284 FOXP1Q9H334 677 aaPredicted RBP17.62■□□□□ 0.41
VRK3-221ENST00000600284 PLXNA4Q9HCM2 1894 aa17.62■□□□□ 0.41
VRK3-221ENST00000600284 WNT7AO00755 349 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 ALADP13716 330 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 AXLP30530 894 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 HOXA11P31270 313 aaPredicted RBP17.61■□□□□ 0.41
VRK3-221ENST00000600284 FOSBP53539 338 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 CLUL1Q15846 466 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 C8orf34Q49A92 452 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 GLB1LQ6UWU2 654 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 TMEM184AQ6ZMB5 413 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 MRPL10Q7Z7H8 261 aaKnown RBP17.61■□□□□ 0.41
VRK3-221ENST00000600284 RNF149Q8NC42 400 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 SMRP1Q8NCR6 262 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 FBXO18Q8NFZ0 1043 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 KIF2CQ99661 725 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 TCF25Q9BQ70 676 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 XPNPEP1Q9NQW7 623 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 PCDHGC5Q9Y5F6 944 aa17.61■□□□□ 0.41
VRK3-221ENST00000600284 PER2O15055 1255 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 OFD1O75665 1012 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 GLP2RO95838 553 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 SRGAP2BP0DMP2 458 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 MCM7P33993 719 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 RBM25P49756 843 aaKnown RBP17.6■□□□□ 0.41
VRK3-221ENST00000600284 BCAR1P56945 870 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 PTENP60484 403 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 TFDP1Q14186 410 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 BMS1Q14692 1282 aaKnown RBP17.6■□□□□ 0.41
VRK3-221ENST00000600284 NOMO2Q5JPE7 1267 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 TMEM31Q5JXX7 168 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 TMC7Q7Z402 723 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 IFNLR1Q8IU57 520 aaPredicted RBP17.6■□□□□ 0.41
VRK3-221ENST00000600284 CNNM3Q8NE01 707 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 TMEM60Q9H2L4 133 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 MINDY3Q9H8M7 445 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 TUFT1Q9NNX1 390 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 ENTPD7Q9NQZ7 604 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 PCDHB2Q9Y5E7 798 aa17.6■□□□□ 0.41
VRK3-221ENST00000600284 CNTNAP2Q9UHC6 1331 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 PBX3P40426 434 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 TRAPPC10P48553 1259 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 RARRES1P49788 294 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 GUCY1B3Q02153 619 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 NCBP1Q09161 790 aaKnown RBP17.59■□□□□ 0.41
VRK3-221ENST00000600284 KCNC3Q14003 757 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 PLPP4Q5VZY2 271 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 FAM184AQ8NB25 1140 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 LPPQ93052 612 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 TMEM169Q96HH4 297 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 CCDC43Q96MW1 224 aaKnown RBP17.59■□□□□ 0.41
VRK3-221ENST00000600284 LRFN3Q9BTN0 628 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 NFKBIZQ9BYH8 718 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 UBN1Q9NPG3 1134 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 BMP2KQ9NSY1 1161 aaPredicted RBP17.59■□□□□ 0.41
VRK3-221ENST00000600284 TBC1D13Q9NVG8 400 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 KANSL3Q9P2N6 904 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 STK39Q9UEW8 545 aa17.59■□□□□ 0.41
VRK3-221ENST00000600284 POTEMA6NI47 508 aa17.58■□□□□ 0.4
VRK3-221ENST00000600284 ERLIN2O94905 339 aa17.58■□□□□ 0.4
VRK3-221ENST00000600284 SPATA31C1P0DKV0 1188 aa17.58■□□□□ 0.4
VRK3-221ENST00000600284 ATP2B1P20020 1258 aa17.58■□□□□ 0.4
VRK3-221ENST00000600284 ARL2P36404 184 aa17.58■□□□□ 0.4
VRK3-221ENST00000600284 SMC1AQ14683 1233 aaKnown RBP17.58■□□□□ 0.4
VRK3-221ENST00000600284 UBXN11Q5T124 520 aa17.58■□□□□ 0.4
VRK3-221ENST00000600284 MRPL43Q8N983 215 aaKnown RBP17.58■□□□□ 0.4
VRK3-221ENST00000600284 URGCPQ8TCY9 931 aa17.58■□□□□ 0.4
VRK3-221ENST00000600284 CCDC51Q96ER9 411 aa17.58■□□□□ 0.4
VRK3-221ENST00000600284 POLR3CQ9BUI4 534 aaPredicted RBP17.58■□□□□ 0.4
VRK3-221ENST00000600284 NRDE2Q9H7Z3 1164 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms