RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 EOMESO95936 686 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 BMPR1AP36894 532 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 MBTD1Q05BQ5 628 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 SPOUT1Q5T280 376 aaKnown RBP31.21■■■□□ 2.59
SSBP4-206ENST00000599699 ZBTB8OSQ8IWT0 167 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 KIFAP3Q92845 792 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 CLP1Q92989 425 aaKnown RBP31.21■■■□□ 2.59
SSBP4-206ENST00000599699 IFT74Q96LB3 600 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 USP28Q96RU2 1077 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 NFKBIZQ9BYH8 718 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 MTCH2Q9Y6C9 303 aa31.21■■■□□ 2.59
SSBP4-206ENST00000599699 SLC26A4O43511 780 aa31.2■■■□□ 2.59
SSBP4-206ENST00000599699 LPXNO60711 386 aa31.2■■■□□ 2.59
SSBP4-206ENST00000599699 GPM6BQ13491 265 aa31.2■■■□□ 2.59
SSBP4-206ENST00000599699 KCTD17Q8N5Z5 321 aa31.2■■■□□ 2.59
SSBP4-206ENST00000599699 TRAIPQ9BWF2 469 aa31.2■■■□□ 2.59
SSBP4-206ENST00000599699 TMEM117Q9H0C3 514 aa31.2■■■□□ 2.59
SSBP4-206ENST00000599699 FAM105AQ9NUU6 356 aa31.2■■■□□ 2.59
SSBP4-206ENST00000599699 TSPAN1O60635 241 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 ZSCAN22P10073 491 aaPredicted RBP31.19■■■□□ 2.58
SSBP4-206ENST00000599699 HOXA11P31270 313 aaPredicted RBP31.19■■■□□ 2.58
SSBP4-206ENST00000599699 RAB27AP51159 221 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 PPP2R5AQ15172 486 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 LONRF3Q496Y0 759 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 TMEM119Q4V9L6 283 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 DEPTORQ8TB45 409 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 BSNDQ8WZ55 320 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 ZNF396Q96N95 335 aaPredicted RBP31.19■■■□□ 2.58
SSBP4-206ENST00000599699 RUSC1Q9BVN2 902 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 CSRNP2Q9H175 543 aa31.19■■■□□ 2.58
SSBP4-206ENST00000599699 TRANK1O15050 2925 aa31.18■■■□□ 2.58
SSBP4-206ENST00000599699 RB1P06400 928 aa31.18■■■□□ 2.58
SSBP4-206ENST00000599699 POU3F3P20264 500 aaPredicted RBP31.18■■■□□ 2.58
SSBP4-206ENST00000599699 AXLP30530 894 aa31.18■■■□□ 2.58
SSBP4-206ENST00000599699 NAMPTP43490 491 aa31.18■■■□□ 2.58
SSBP4-206ENST00000599699 RINT1Q6NUQ1 792 aa31.18■■■□□ 2.58
SSBP4-206ENST00000599699 ZNF598Q86UK7 904 aaKnown RBP31.18■■■□□ 2.58
SSBP4-206ENST00000599699 CPB2Q96IY4 423 aa31.18■■■□□ 2.58
SSBP4-206ENST00000599699 C11orf84Q9BUA3 381 aaPredicted RBP31.18■■■□□ 2.58
SSBP4-206ENST00000599699 C2orf40Q9H1Z8 148 aa31.18■■■□□ 2.58
SSBP4-206ENST00000599699 FBXO2Q9UK22 296 aaPredicted RBP31.18■■■□□ 2.58
SSBP4-206ENST00000599699 SRPRBQ9Y5M8 271 aaKnown RBP31.18■■■□□ 2.58
SSBP4-206ENST00000599699 H3BNC9 293 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 LINC00271P0C7V0 271 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 PLA2G4BP0C869 781 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 ATF7P17544 494 aaPredicted RBP31.17■■■□□ 2.58
SSBP4-206ENST00000599699 FOXD4L6Q3SYB3 417 aaPredicted RBP31.17■■■□□ 2.58
SSBP4-206ENST00000599699 SPECC1Q5M775 1068 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 NOTUMQ6P988 496 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 FOXD4L3Q6VB84 417 aaPredicted RBP31.17■■■□□ 2.58
SSBP4-206ENST00000599699 HELQQ8TDG4 1101 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 LPPQ93052 612 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 CASD1Q96PB1 797 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 RNF19AQ9NV58 838 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 PCDHB2Q9Y5E7 798 aa31.17■■■□□ 2.58
SSBP4-206ENST00000599699 C5orf67F2Z3F1 127 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 HIP1RO75146 1068 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 LIG1P18858 919 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 SLC39A14Q15043 492 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 KARSQ15046 597 aaKnown RBP31.16■■■□□ 2.58
SSBP4-206ENST00000599699 STK38Q15208 465 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 CLLU1OSQ5K130 101 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 CDCA2Q69YH5 1023 aaPredicted RBP31.16■■■□□ 2.58
SSBP4-206ENST00000599699 C1orf186Q6ZWK4 172 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 SYT2Q8N9I0 419 aaPredicted RBP31.16■■■□□ 2.58
SSBP4-206ENST00000599699 PGBD4Q96DM1 585 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 PLVAPQ9BX97 442 aa31.16■■■□□ 2.58
SSBP4-206ENST00000599699 TYW1Q9NV66 732 aaKnown RBP31.16■■■□□ 2.58
SSBP4-206ENST00000599699 PRMT7Q9NVM4 692 aaPredicted RBP31.16■■■□□ 2.58
SSBP4-206ENST00000599699 TFIP11Q9UBB9 837 aaKnown RBP31.16■■■□□ 2.58
SSBP4-206ENST00000599699 F13A1P00488 732 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 RAD51AP2Q09MP3 1159 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 AMHR2Q16671 573 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 PTPROQ16827 1216 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 TMEM132AQ24JP5 1023 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 CCDC51Q96ER9 411 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 DRC1Q96MC2 740 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 CLIC6Q96NY7 704 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 AAASQ9NRG9 546 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 LMCD1Q9NZU5 365 aa31.15■■■□□ 2.58
SSBP4-206ENST00000599699 COL4A4P53420 1690 aaPredicted RBP31.15■■■□□ 2.58
SSBP4-206ENST00000599699 B4GALT5O43286 388 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 ZNF623O75123 536 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 ARF4P18085 180 aaPredicted RBP31.14■■■□□ 2.58
SSBP4-206ENST00000599699 PLCG1P19174 1290 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 DHX8Q14562 1220 aaKnown RBP31.14■■■□□ 2.58
SSBP4-206ENST00000599699 UBXN11Q5T124 520 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 LRRC43Q8N309 656 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 KRI1Q8N9T8 703 aaKnown RBP31.14■■■□□ 2.58
SSBP4-206ENST00000599699 SLC17A8Q8NDX2 589 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 EPSTI1Q96J88 318 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 KIFC3Q9BVG8 833 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 TIPINQ9BVW5 301 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 HCSTQ9UBK5 93 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 PCDHB12Q9Y5F1 795 aa31.14■■■□□ 2.58
SSBP4-206ENST00000599699 CCDC169A6NNP5 214 aa31.13■■■□□ 2.57
SSBP4-206ENST00000599699 TXLNAP40222 546 aa31.13■■■□□ 2.57
SSBP4-206ENST00000599699 NASPP49321 788 aaPredicted RBP31.13■■■□□ 2.57
SSBP4-206ENST00000599699 SLC12A3P55017 1021 aa31.13■■■□□ 2.57
SSBP4-206ENST00000599699 PKP1Q13835 747 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms