RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 XKR9Q5GH70 373 aa25.59■■□□□ 1.69
CCDC61-207ENST00000599044 HSD17B14Q9BPX1 270 aa25.59■■□□□ 1.69
CCDC61-207ENST00000599044 TCF25Q9BQ70 676 aa25.59■■□□□ 1.69
CCDC61-207ENST00000599044 EIF2AK1Q9BQI3 630 aaKnown RBP25.59■■□□□ 1.69
CCDC61-207ENST00000599044 INO80BQ9C086 356 aaPredicted RBP25.59■■□□□ 1.69
CCDC61-207ENST00000599044 ZSWIM4Q9H7M6 989 aa25.59■■□□□ 1.69
CCDC61-207ENST00000599044 PCDHA12Q9UN75 941 aa25.59■■□□□ 1.69
CCDC61-207ENST00000599044 TRIOO75962 3097 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 PIEZO1Q92508 2521 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 A0A087WWV3 80 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 RFC5P40937 340 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 COASYQ13057 564 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 EMC2Q15006 297 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 CALCRLQ16602 461 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 SLC39A11Q8N1S5 342 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 SMRP1Q8NCR6 262 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 MTMR9Q96QG7 549 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 FAM105AQ9NUU6 356 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 SPG21Q9NZD8 308 aa25.58■■□□□ 1.69
CCDC61-207ENST00000599044 TXKP42681 527 aa25.57■■□□□ 1.68
CCDC61-207ENST00000599044 BCAR1P56945 870 aa25.57■■□□□ 1.68
CCDC61-207ENST00000599044 KCNC3Q14003 757 aa25.57■■□□□ 1.68
CCDC61-207ENST00000599044 OTUD6AQ7L8S5 288 aa25.57■■□□□ 1.68
CCDC61-207ENST00000599044 PSPC1Q8WXF1 523 aaKnown RBP25.57■■□□□ 1.68
CCDC61-207ENST00000599044 TMEM60Q9H2L4 133 aa25.57■■□□□ 1.68
CCDC61-207ENST00000599044 TTC12Q9H892 705 aaPredicted RBP25.57■■□□□ 1.68
CCDC61-207ENST00000599044 XPNPEP1Q9NQW7 623 aa25.57■■□□□ 1.68
CCDC61-207ENST00000599044 AGPAT5Q9NUQ2 364 aa25.57■■□□□ 1.68
CCDC61-207ENST00000599044 PUF60Q9UHX1 559 aaKnown RBP25.57■■□□□ 1.68
CCDC61-207ENST00000599044 HCN4Q9Y3Q4 1203 aa25.57■■□□□ 1.68
CCDC61-207ENST00000599044 HOXA11P31270 313 aaPredicted RBP25.56■■□□□ 1.68
CCDC61-207ENST00000599044 TRIM29Q14134 588 aa25.56■■□□□ 1.68
CCDC61-207ENST00000599044 PDE12Q6L8Q7 609 aaKnown RBP25.56■■□□□ 1.68
CCDC61-207ENST00000599044 FERMT3Q86UX7 667 aa25.56■■□□□ 1.68
CCDC61-207ENST00000599044 TMEM173Q86WV6 379 aaPredicted RBP25.56■■□□□ 1.68
CCDC61-207ENST00000599044 CCDC83Q8IWF9 413 aa25.56■■□□□ 1.68
CCDC61-207ENST00000599044 KIF2CQ99661 725 aa25.56■■□□□ 1.68
CCDC61-207ENST00000599044 ENTPD7Q9NQZ7 604 aa25.56■■□□□ 1.68
CCDC61-207ENST00000599044 LIMCH1Q9UPQ0 1083 aa25.56■■□□□ 1.68
CCDC61-207ENST00000599044 PPME1Q9Y570 386 aa25.56■■□□□ 1.68
CCDC61-207ENST00000599044 ZNF318Q5VUA4 2279 aa25.56■■□□□ 1.68
CCDC61-207ENST00000599044 NEMFO60524 1076 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 ZNF623O75123 536 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 OFD1O75665 1012 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 ATP2B1P20020 1258 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 PPM1AP35813 382 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 AFF1P51825 1210 aaKnown RBP25.55■■□□□ 1.68
CCDC61-207ENST00000599044 KRT17Q04695 432 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 UBXN11Q5T124 520 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 RNF149Q8NC42 400 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 USP15Q9Y4E8 981 aaPredicted RBP25.55■■□□□ 1.68
CCDC61-207ENST00000599044 PCDHB2Q9Y5E7 798 aa25.55■■□□□ 1.68
CCDC61-207ENST00000599044 B4GALT3O60512 393 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 AGMOQ6ZNB7 445 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 TMC7Q7Z402 723 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 SRGAP1Q7Z6B7 1085 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 EXOC8Q8IYI6 725 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 BCL7CQ8WUZ0 217 aaPredicted RBP25.54■■□□□ 1.68
CCDC61-207ENST00000599044 CDCA3Q99618 268 aaPredicted RBP25.54■■□□□ 1.68
CCDC61-207ENST00000599044 MTRQ99707 1265 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 MRPL9Q9BYD2 267 aaKnown RBP25.54■■□□□ 1.68
CCDC61-207ENST00000599044 NRDE2Q9H7Z3 1164 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 TBC1D13Q9NVG8 400 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 INPP5FQ9Y2H2 1132 aa25.54■■□□□ 1.68
CCDC61-207ENST00000599044 DCXO43602 365 aa25.53■■□□□ 1.68
CCDC61-207ENST00000599044 ZC3H11AO75152 810 aaKnown RBP eCLIP25.53■■□□□ 1.68
CCDC61-207ENST00000599044 LYPLA2O95372 231 aa25.53■■□□□ 1.68
CCDC61-207ENST00000599044 ALADP13716 330 aa25.53■■□□□ 1.68
CCDC61-207ENST00000599044 NOMO2Q5JPE7 1267 aa25.53■■□□□ 1.68
CCDC61-207ENST00000599044 LLGL2Q6P1M3 1020 aa25.53■■□□□ 1.68
CCDC61-207ENST00000599044 PIGOQ8TEQ8 1089 aa25.53■■□□□ 1.68
CCDC61-207ENST00000599044 TCP11Q8WWU5 503 aa25.53■■□□□ 1.68
CCDC61-207ENST00000599044 NGRNQ9NPE2 291 aaKnown RBP25.53■■□□□ 1.68
CCDC61-207ENST00000599044 DNAJB4Q9UDY4 337 aa25.53■■□□□ 1.68
CCDC61-207ENST00000599044 POTEMA6NI47 508 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 EIF5BO60841 1220 aaKnown RBP25.52■■□□□ 1.68
CCDC61-207ENST00000599044 SKIP12755 728 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 MCM7P33993 719 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 ALDH7A1P49419 539 aaKnown RBP25.52■■□□□ 1.68
CCDC61-207ENST00000599044 GLB1LQ6UWU2 654 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 TMEM184AQ6ZMB5 413 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 MRPL10Q7Z7H8 261 aaKnown RBP25.52■■□□□ 1.68
CCDC61-207ENST00000599044 ZNF280BQ86YH2 543 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 RNF135Q8IUD6 432 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 MRPL43Q8N983 215 aaKnown RBP25.52■■□□□ 1.68
CCDC61-207ENST00000599044 ASAP3Q8TDY4 903 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 S1PR5Q9H228 398 aa25.52■■□□□ 1.68
CCDC61-207ENST00000599044 PRR33A8MZF0 331 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 ASAP2O43150 1006 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 GAS2O43903 313 aaKnown RBP25.51■■□□□ 1.67
CCDC61-207ENST00000599044 SPATA31C1P0DKV0 1188 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 RAB27AP51159 221 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 SYCE2Q6PIF2 218 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 AUTS2Q8WXX7 1259 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 APOL5Q9BWW9 433 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 ANKEF1Q9NU02 776 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 MUTYHQ9UIF7 546 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 ARID2Q68CP9 1835 aa25.51■■□□□ 1.67
CCDC61-207ENST00000599044 C2orf71A6NGG8 1288 aa25.5■■□□□ 1.67
CCDC61-207ENST00000599044 DDHD2O94830 711 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms