RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.22■■□□□ 1.15
IRF3-221ENST00000598808 DYMQ7RTS9 669 aa22.22■■□□□ 1.15
IRF3-221ENST00000598808 SRGAP1Q7Z6B7 1085 aa22.22■■□□□ 1.15
IRF3-221ENST00000598808 FSIP1Q8NA03 581 aa22.22■■□□□ 1.15
IRF3-221ENST00000598808 REEP2Q9BRK0 252 aa22.22■■□□□ 1.15
IRF3-221ENST00000598808 FTHL17Q9BXU8 183 aa22.22■■□□□ 1.15
IRF3-221ENST00000598808 IFT122Q9HBG6 1241 aa22.22■■□□□ 1.15
IRF3-221ENST00000598808 KCNH3Q9ULD8 1083 aa22.22■■□□□ 1.15
IRF3-221ENST00000598808 PIN4Q9Y237 131 aaKnown RBP22.22■■□□□ 1.15
IRF3-221ENST00000598808 MICAL3Q7RTP6 2002 aa22.21■■□□□ 1.15
IRF3-221ENST00000598808 UPP2O95045 317 aa22.21■■□□□ 1.15
IRF3-221ENST00000598808 ZSCAN20P17040 1043 aaPredicted RBP22.21■■□□□ 1.15
IRF3-221ENST00000598808 NAMPTP43490 491 aa22.21■■□□□ 1.15
IRF3-221ENST00000598808 NAALADL2Q58DX5 795 aa22.21■■□□□ 1.15
IRF3-221ENST00000598808 TMCO2Q7Z6W1 182 aaPredicted RBP22.21■■□□□ 1.15
IRF3-221ENST00000598808 STAMQ92783 540 aa22.21■■□□□ 1.15
IRF3-221ENST00000598808 LRCH3Q96II8 777 aa22.21■■□□□ 1.15
IRF3-221ENST00000598808 CMA1P23946 247 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 PTENP60484 403 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 ZSCAN23Q3MJ62 389 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 LRIT3Q3SXY7 679 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 ARSHQ5FYA8 562 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 CEP57L1Q8IYX8 460 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 MRPS27Q92552 414 aaKnown RBP22.2■■□□□ 1.14
IRF3-221ENST00000598808 SLC9A7Q96T83 725 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 ADAM2Q99965 735 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 PYM1Q9BRP8 204 aaKnown RBP22.2■■□□□ 1.14
IRF3-221ENST00000598808 ZBED2Q9BTP6 218 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 C2orf40Q9H1Z8 148 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 TMX1Q9H3N1 280 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 MINDY3Q9H8M7 445 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 KMT5AQ9NQR1 393 aa22.2■■□□□ 1.14
IRF3-221ENST00000598808 GRXCR1A8MXD5 290 aa22.19■■□□□ 1.14
IRF3-221ENST00000598808 GADD45BO75293 160 aaPredicted RBP22.19■■□□□ 1.14
IRF3-221ENST00000598808 DAW1Q8N136 415 aa22.19■■□□□ 1.14
IRF3-221ENST00000598808 MYH11P35749 1972 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 IDEP14735 1019 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 MRE11P49959 708 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 MBTD1Q05BQ5 628 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 NCBP1Q09161 790 aaKnown RBP22.18■■□□□ 1.14
IRF3-221ENST00000598808 MAPK7Q13164 816 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 RASIP1Q5U651 963 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 TWF2Q6IBS0 349 aaKnown RBP22.18■■□□□ 1.14
IRF3-221ENST00000598808 FAM109BQ6ICB4 259 aaPredicted RBP22.18■■□□□ 1.14
IRF3-221ENST00000598808 MYCT1Q8N699 235 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 DDX12PQ92771 950 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 CUEDC2Q9H467 287 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 LRFN2Q9ULH4 789 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 ODF2LQ9ULJ1 636 aa22.18■■□□□ 1.14
IRF3-221ENST00000598808 MGEA5O60502 916 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 PLS3P13797 630 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 SYKP43405 635 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 NPTX2P47972 431 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 RABGGTBP53611 331 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 E2F4Q16254 413 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 CCDC183Q5T5S1 534 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 RNF169Q8NCN4 708 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 LINC01599Q8WXQ3 324 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 PARVGQ9HBI0 331 aa22.17■■□□□ 1.14
IRF3-221ENST00000598808 LARSQ9P2J5 1176 aaKnown RBP22.17■■□□□ 1.14
IRF3-221ENST00000598808 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.16■■□□□ 1.14
IRF3-221ENST00000598808 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.16■■□□□ 1.14
IRF3-221ENST00000598808 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.16■■□□□ 1.14
IRF3-221ENST00000598808 A0A1W2PQ27 194 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 A0A1W2PQ64 194 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 A0A1W2PQD8 194 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 MYMKA6NI61 221 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 ENPP3O14638 875 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 SLC16A4O15374 487 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 AFMP43652 599 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 NDUFA8P51970 172 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 SMTNP53814 917 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 AMPD3Q01432 767 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 GIT2Q14161 759 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 CDCA2Q69YH5 1023 aaPredicted RBP22.16■■□□□ 1.14
IRF3-221ENST00000598808 CPB2Q96IY4 423 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 LRRC27Q9C0I9 530 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 TSPYL2Q9H2G4 693 aaPredicted RBP22.16■■□□□ 1.14
IRF3-221ENST00000598808 TNMDQ9H2S6 317 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 TMEM63CQ9P1W3 806 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 SERTAD1Q9UHV2 236 aa22.16■■□□□ 1.14
IRF3-221ENST00000598808 PRKCBP05771 671 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 POU5F1BQ06416 359 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 MAPK6Q16659 721 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 HERC6Q8IVU3 1022 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 NFKBIZQ9BYH8 718 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 GOLPH3LQ9H4A5 285 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 C17orf75Q9HAS0 396 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 MAGEF1Q9HAY2 307 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 AGPAT5Q9NUQ2 364 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 PRMT7Q9NVM4 692 aaPredicted RBP22.15■■□□□ 1.14
IRF3-221ENST00000598808 DACT1Q9NYF0 836 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 ADGRA3Q8IWK6 1321 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 K7ENM7 598 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 TLL1O43897 1013 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 TSPAN1O60635 241 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 EFNA5P52803 228 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 ASIC1P78348 528 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 PHOSPHO2Q8TCD6 241 aa22.15■■□□□ 1.14
IRF3-221ENST00000598808 RGS18Q9NS28 235 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms