RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-223	ENST00000598717	CASP5	P51878	434 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	PTEN	P60484	403 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	GTF2B	Q00403	316 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	STRN3	Q13033	797 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	BFSP2	Q13515	415 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	DPCR1	Q3MIW9	517 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	CDCA2	Q69YH5	1023 aa	Predicted RBP	21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	GUF1	Q8N442	669 aa	Known RBP	21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	GLIS3	Q8NEA6	775 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	CAGE1	Q8TC20	777 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	DHX38	Q92620	1227 aa	Known RBP	21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	HVCN1	Q96D96	273 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	NFKBIZ	Q9BYH8	718 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	CELF4	Q9BZC1	486 aa	Known RBP	21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	INO80B	Q9C086	356 aa	Predicted RBP	21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	ADAMTS10	Q9H324	1103 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	TRPV2	Q9Y5S1	764 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	CDY2A	Q9Y6F7	541 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	ADGRA3	Q8IWK6	1321 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	MYH11	P35749	1972 aa		21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	TRIP12	Q14669	1992 aa	Predicted RBP	21.23	■□□□□ 0.99
LTBP4-223	ENST00000598717	INO80B-WBP1	J3KQ70	363 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	CTSH	P09668	335 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	CRYBB1	P53674	252 aa	Predicted RBP	21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	ZNF445	P59923	1031 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	LRRC26	Q2I0M4	334 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	TRIM71	Q2Q1W2	868 aa	Known RBP	21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	COBLL1	Q53SF7	1204 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	LRSAM1	Q6UWE0	723 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	EPM2AIP1	Q7L775	607 aa	Predicted RBP	21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	SRGAP1	Q7Z6B7	1085 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	ZNF507	Q8TCN5	953 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	SCFD1	Q8WVM8	642 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	ACCS	Q96QU6	501 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	OSMR	Q99650	979 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	FUCA2	Q9BTY2	467 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	TMEM134	Q9H6X4	195 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	IFT122	Q9HBG6	1241 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	TBX20	Q9UMR3	447 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	EXOC7	Q9UPT5	735 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	UBE4B	O95155	1302 aa		21.22	■□□□□ 0.99
LTBP4-223	ENST00000598717	KIAA0100	Q14667	2235 aa	Known RBP	21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	CCDC85C	A6NKD9	419 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	PPP1R3G	B7ZBB8	358 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	PSMA7	O14818	248 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	PPP1R37	O75864	691 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	MAPK6	Q16659	721 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	KLHL10	Q6JEL2	608 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	IFNLR1	Q8IU57	520 aa	Predicted RBP	21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	NELFCD	Q8IXH7	590 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	SYCP3	Q8IZU3	236 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	TNS4	Q8IZW8	715 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	ADSSL1	Q8N142	457 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	STRA6	Q9BX79	667 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	NAT10	Q9H0A0	1025 aa	Known RBP	21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	TMEM206	Q9H813	350 aa		21.21	■□□□□ 0.99
LTBP4-223	ENST00000598717	CKB	P12277	381 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	CD44	P16070	742 aa	Known RBP	21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	FAAP100	Q0VG06	881 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	BMT2	Q1RMZ1	405 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	ANO6	Q4KMQ2	910 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	CT47A1	Q5JQC4	288 aa	Predicted RBP	21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	ZNF618	Q5T7W0	954 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	UBE2Q1	Q7Z7E8	422 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	KCNN1	Q92952	543 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	DHTKD1	Q96HY7	919 aa	Predicted RBP	21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	DNAJC25	Q9H1X3	360 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	TSPY26P	Q9H489	355 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	CDHR5	Q9HBB8	845 aa		21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	PRMT7	Q9NVM4	692 aa	Predicted RBP	21.2	■□□□□ 0.98
LTBP4-223	ENST00000598717	CHRNA1	P02708	482 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	PRKCB	P05771	671 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	CLTB	P09497	229 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	DARS	P14868	501 aa	Known RBP	21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	EIF4B	P23588	611 aa	Known RBP	21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	MBTD1	Q05BQ5	628 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	MGAT3	Q09327	533 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	KNOP1	Q1ED39	458 aa	Known RBP	21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	FAM26D	Q5JW98	314 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	BICD1	Q96G01	975 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	CCDC113	Q9H0I3	377 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	TMEM39A	Q9NV64	488 aa		21.19	■□□□□ 0.98
LTBP4-223	ENST00000598717	CSDE1	O75534	798 aa	Known RBP	21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	ERLIN2	O94905	339 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	SELP	P16109	830 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	SFPQ	P23246	707 aa	Known RBP eCLIP	21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	RBL2	Q08999	1139 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	KCNA1	Q09470	495 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	PAK1	Q13153	545 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	PCBP1	Q15365	356 aa	Known RBP eCLIP	21.18	■□□□□ 0.98	2e-6	■■■□□ 17.5
LTBP4-223	ENST00000598717	TMEM132A	Q24JP5	1023 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	C11orf57	Q6ZUT1	292 aa	Predicted RBP	21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	TAS1R3	Q7RTX0	852 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	MAP4K3	Q8IVH8	894 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	NELFB	Q8WX92	580 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	TSG101	Q99816	390 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	FZD8	Q9H461	694 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	MINDY3	Q9H8M7	445 aa		21.18	■□□□□ 0.98
LTBP4-223	ENST00000598717	CTNND2	Q9UQB3	1225 aa		21.18	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms