RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 INPP5FQ9Y2H2 1132 aa21.15■□□□□ 0.98
SNRPA-204ENST00000598452 COL4A3BPQ9Y5P4 624 aa21.15■□□□□ 0.98
SNRPA-204ENST00000598452 ZBTB39O15060 712 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 MARCH6O60337 910 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 SRGAP2BP0DMP2 458 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 SP100P23497 879 aaPredicted RBP21.14■□□□□ 0.97
SNRPA-204ENST00000598452 AK2P54819 239 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 NR5A1Q13285 461 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 NECAB1Q8N987 351 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 PRPF31Q8WWY3 499 aaKnown RBP21.14■□□□□ 0.97
SNRPA-204ENST00000598452 AUTS2Q8WXX7 1259 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 SLC7A3Q8WY07 619 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 RSPH1Q8WYR4 309 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 LXNQ9BS40 222 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 DHX33Q9H6R0 707 aaKnown RBP21.14■□□□□ 0.97
SNRPA-204ENST00000598452 TBC1D13Q9NVG8 400 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 HCFC2Q9Y5Z7 792 aa21.14■□□□□ 0.97
SNRPA-204ENST00000598452 CXCL14O95715 111 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 SRGAP2CP0DJJ0 459 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 FDPSP14324 419 aaKnown RBP21.13■□□□□ 0.97
SNRPA-204ENST00000598452 POLGP54098 1239 aaPredicted RBP21.13■□□□□ 0.97
SNRPA-204ENST00000598452 ANAPC15P60006 121 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 ZXDAP98168 799 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 EPHA7Q15375 998 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 NOMO2Q5JPE7 1267 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 NCAPH2Q6IBW4 605 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 GLB1LQ6UWU2 654 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 TRIM67Q6ZTA4 783 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 EXOC8Q8IYI6 725 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 BCL7CQ8WUZ0 217 aaPredicted RBP21.13■□□□□ 0.97
SNRPA-204ENST00000598452 WASF1Q92558 559 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 TMEM169Q96HH4 297 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 DYDC2Q96IM9 177 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 FBXL18Q96ME1 805 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 NRDE2Q9H7Z3 1164 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 MINDY3Q9H8M7 445 aa21.13■□□□□ 0.97
SNRPA-204ENST00000598452 TBX3O15119 743 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 B4GALT3O60512 393 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 CLASP2O75122 1294 aaKnown RBP21.12■□□□□ 0.97
SNRPA-204ENST00000598452 ZNF623O75123 536 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 OFD1O75665 1012 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 SKIP12755 728 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 YWHABP31946 246 aaKnown RBP21.12■□□□□ 0.97
SNRPA-204ENST00000598452 CYP4A11Q02928 519 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 SPIRE1Q08AE8 756 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 CTTNQ14247 550 aaKnown RBP21.12■□□□□ 0.97
SNRPA-204ENST00000598452 C4orf19Q8IY42 314 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 VPS52Q8N1B4 723 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 CASP10Q92851 521 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 MFSD14AQ96MC6 490 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 GBP3Q9H0R5 595 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 AGPAT5Q9NUQ2 364 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 PCDHB2Q9Y5E7 798 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 MUC6Q6W4X9 2439 aa21.12■□□□□ 0.97
SNRPA-204ENST00000598452 CARNS1A5YM72 827 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 TMEM221A6NGB7 291 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 M0R296 226 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 LARGE1O95461 756 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 GALTP07902 379 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 HOXB8P17481 243 aaPredicted RBP21.11■□□□□ 0.97
SNRPA-204ENST00000598452 RAB27AP51159 221 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 LAMTOR4Q0VGL1 99 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 XKR9Q5GH70 373 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 ERICH6BQ5W0A0 696 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 AGMOQ6ZNB7 445 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 PSPC1Q8WXF1 523 aaKnown RBP21.11■□□□□ 0.97
SNRPA-204ENST00000598452 IGSF21Q96ID5 467 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 ZBP1Q9H171 429 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 DNAJB4Q9UDY4 337 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 TRIOO75962 3097 aa21.11■□□□□ 0.97
SNRPA-204ENST00000598452 TECTAO75443 2155 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.1■□□□□ 0.97
SNRPA-204ENST00000598452 HOXA11P31270 313 aaPredicted RBP21.1■□□□□ 0.97
SNRPA-204ENST00000598452 KRT2P35908 639 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 RFC5P40937 340 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 AFF1P51825 1210 aaKnown RBP21.1■□□□□ 0.97
SNRPA-204ENST00000598452 FOSBP53539 338 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 RNASELQ05823 741 aaKnown RBP21.1■□□□□ 0.97
SNRPA-204ENST00000598452 EMC2Q15006 297 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 ME3Q16798 604 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 ALYREFQ86V81 257 aaKnown RBP21.1■□□□□ 0.97
SNRPA-204ENST00000598452 ZNF280BQ86YH2 543 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 TNFRSF25Q93038 417 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 PBXIP1Q96AQ6 731 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 PPME1Q9Y570 386 aa21.1■□□□□ 0.97
SNRPA-204ENST00000598452 WEE2P0C1S8 567 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 SLC11A1P49279 550 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 UBXN11Q5T124 520 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 KANK3Q6NY19 840 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 OTUD6AQ7L8S5 288 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 SRGAP1Q7Z6B7 1085 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 DDX53Q86TM3 631 aaKnown RBP21.09■□□□□ 0.97
SNRPA-204ENST00000598452 FERMT3Q86UX7 667 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 TPH2Q8IWU9 490 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 C12orf76Q8N812 135 aaPredicted RBP21.09■□□□□ 0.97
SNRPA-204ENST00000598452 RNF149Q8NC42 400 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 PGBD4Q96DM1 585 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 VN1R3Q9BXE9 311 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 ZSWIM4Q9H7M6 989 aa21.09■□□□□ 0.97
SNRPA-204ENST00000598452 BRMS1Q9HCU9 246 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms