RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 RWDD3Q9Y3V2 267 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 MRPL42Q9Y6G3 142 aaKnown RBP18.54■□□□□ 0.56
SSBP4-204ENST00000597724 RALGAPA2Q2PPJ7 1873 aa18.54■□□□□ 0.56
SSBP4-204ENST00000597724 PRRC2BQ5JSZ5 2229 aaKnown RBP18.53■□□□□ 0.56
SSBP4-204ENST00000597724 LRRIQ4A6NIV6 560 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 TBKBP1A7MCY6 615 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 C5orf67F2Z3F1 127 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 H3BNC9 293 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 HOXA2O43364 376 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 GTPBP6O43824 516 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-204ENST00000597724 ZNF623O75123 536 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 ERLIN2O94905 339 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 ATF7P17544 494 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-204ENST00000597724 MARCKSP29966 332 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-204ENST00000597724 SLC39A14Q15043 492 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 AMHR2Q16671 573 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 TMEM119Q4V9L6 283 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 RINT1Q6NUQ1 792 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 KIFAP3Q92845 792 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 PLIN2Q99541 437 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 POLD4Q9HCU8 107 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 LMCD1Q9NZU5 365 aa18.53■□□□□ 0.56
SSBP4-204ENST00000597724 FBXO2Q9UK22 296 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-204ENST00000597724 SRPRBQ9Y5M8 271 aaKnown RBP18.53■□□□□ 0.56
SSBP4-204ENST00000597724 MORC2Q9Y6X9 1032 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-204ENST00000597724 COL4A4P53420 1690 aaPredicted RBP18.53■□□□□ 0.56
SSBP4-204ENST00000597724 TSPAN1O60635 241 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 RB1P06400 928 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-204ENST00000597724 SKIP12755 728 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 AXLP30530 894 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 CTNNB1P35222 781 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 RAB27AP51159 221 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 NCBP1Q09161 790 aaKnown RBP18.52■□□□□ 0.56
SSBP4-204ENST00000597724 GPM6BQ13491 265 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 CDCA2Q69YH5 1023 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-204ENST00000597724 C1orf186Q6ZWK4 172 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 SYT2Q8N9I0 419 aaPredicted RBP18.52■□□□□ 0.56
SSBP4-204ENST00000597724 RNF169Q8NCN4 708 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 BSNDQ8WZ55 320 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 CALML4Q96GE6 196 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 CASD1Q96PB1 797 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 TMEM117Q9H0C3 514 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 FAM105AQ9NUU6 356 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 UNC80Q8N2C7 3258 aa18.52■□□□□ 0.56
SSBP4-204ENST00000597724 NAMPTP43490 491 aa18.51■□□□□ 0.55
SSBP4-204ENST00000597724 NASPP49321 788 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-204ENST00000597724 PPP2R5AQ15172 486 aa18.51■□□□□ 0.55
SSBP4-204ENST00000597724 UBXN11Q5T124 520 aa18.51■□□□□ 0.55
SSBP4-204ENST00000597724 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-204ENST00000597724 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
SSBP4-204ENST00000597724 PPM1EQ8WY54 764 aa18.51■□□□□ 0.55
SSBP4-204ENST00000597724 RUSC1Q9BVN2 902 aa18.51■□□□□ 0.55
SSBP4-204ENST00000597724 PLVAPQ9BX97 442 aa18.51■□□□□ 0.55
SSBP4-204ENST00000597724 CSRNP2Q9H175 543 aa18.51■□□□□ 0.55
SSBP4-204ENST00000597724 C2orf40Q9H1Z8 148 aa18.51■□□□□ 0.55
SSBP4-204ENST00000597724 F13A1P00488 732 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 PLA2G4BP0C869 781 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 GUCY2CP25092 1073 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 SLC12A3P55017 1021 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 KARSQ15046 597 aaKnown RBP18.5■□□□□ 0.55
SSBP4-204ENST00000597724 CCDC85BQ15834 202 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-204ENST00000597724 CLLU1OSQ5K130 101 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 NOTUMQ6P988 496 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 MRPL10Q7Z7H8 261 aaKnown RBP18.5■□□□□ 0.55
SSBP4-204ENST00000597724 ZBTB8OSQ8IWT0 167 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 ABI1Q8IZP0 508 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 DAW1Q8N136 415 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 P2RX5Q93086 422 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 CPB2Q96IY4 423 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 EPSTI1Q96J88 318 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 IFT74Q96LB3 600 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-204ENST00000597724 C11orf84Q9BUA3 381 aaPredicted RBP18.5■□□□□ 0.55
SSBP4-204ENST00000597724 TIPINQ9BVW5 301 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 CCSER1Q9C0I3 900 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 FZD8Q9H461 694 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 CWH43Q9H720 699 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 TYW1Q9NV66 732 aaKnown RBP18.5■□□□□ 0.55
SSBP4-204ENST00000597724 PCDHB2Q9Y5E7 798 aa18.5■□□□□ 0.55
SSBP4-204ENST00000597724 KIAA1671Q9BY89 1806 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 B4GALT5O43286 388 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 HIP1RO75146 1068 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 SSBP05455 408 aaKnown RBP eCLIP18.49■□□□□ 0.55
SSBP4-204ENST00000597724 ARF4P18085 180 aaPredicted RBP18.49■□□□□ 0.55
SSBP4-204ENST00000597724 MAPK7Q13164 816 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 PKP1Q13835 747 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 FAM187BQ17R55 369 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 LONRF3Q496Y0 759 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 NAALADL2Q58DX5 795 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 SPECC1Q5M775 1068 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 PPP4R3CPQ6ZMV5 832 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 LRRC55Q6ZSA7 311 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 USP49Q70CQ1 688 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 MICALL1Q8N3F8 863 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 LINC00301Q8NCQ3 95 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 DEPTORQ8TB45 409 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 HELQQ8TDG4 1101 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 LRRC15Q8TF66 581 aa18.49■□□□□ 0.55
SSBP4-204ENST00000597724 LPPQ93052 612 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms