RNA–Protein interactions for RNA: ENST00000597552.1

TIMM50-208, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 369 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-208	ENST00000597552	SLC7A3	Q8WY07	619 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	LLPH	Q9BRT6	129 aa	Known RBP	11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	ZSWIM4	Q9H7M6	989 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	IFT122	Q9HBG6	1241 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	CLEC1B	Q9P126	229 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	TRIO	O75962	3097 aa		11.17	□□□□□ -0.62
TIMM50-208	ENST00000597552	FGF18	O76093	207 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	SFPQ	P23246	707 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	ZXDA	P98168	799 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	RBM10	P98175	930 aa	Known RBP	11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	LAMTOR4	Q0VGL1	99 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	SAFB	Q15424	915 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	TWF2	Q6IBS0	349 aa	Known RBP	11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	CATSPER4	Q7RTX7	472 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	RBM23	Q86U06	439 aa	Known RBP	11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	ZNF598	Q86UK7	904 aa	Known RBP	11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	ZNF410	Q86VK4	478 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	THNSL1	Q8IYQ7	743 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	EFHB	Q8N7U6	833 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	FBXO18	Q8NFZ0	1043 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	P2RX5	Q93086	422 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	PPP2R3C	Q969Q6	453 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	MTR	Q99707	1265 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	HSD17B14	Q9BPX1	270 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	TMEM117	Q9H0C3	514 aa		11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552	ELAC1	Q9H777	363 aa	Known RBP	11.16	□□□□□ -0.62
TIMM50-208	ENST00000597552		A0A0U1RQF3	1178 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	LOC730098	B7Z3J9	87 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	NT5C1B-RDH14	C9J2C7	533 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	PER2	O15055	1255 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	ST18	O60284	1047 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	USO1	O60763	962 aa	Known RBP	11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	DKC1	O60832	514 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	MED24	O75448	989 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	OR52Z1	P0C646	297 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	RFC5	P40937	340 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	TEC	P42680	631 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	PHKA2	P46019	1235 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	NRIP1	P48552	1158 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	ERVFC1	P60507	584 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	HMGN5	P82970	282 aa	Known RBP	11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	TCF15	Q12870	199 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	COASY	Q13057	564 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	GNL2	Q13823	731 aa	Known RBP	11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	RABEP1	Q15276	862 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	TTC38	Q5R3I4	469 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	POTEG	Q6S5H5	508 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	MAEA	Q7L5Y9	396 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	FERMT3	Q86UX7	667 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	NOSTRIN	Q8IVI9	506 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	ABI1	Q8IZP0	508 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	FBXL6	Q8N531	539 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	RNF149	Q8NC42	400 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	SMRP1	Q8NCR6	262 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	ASAP3	Q8TDY4	903 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	PSPC1	Q8WXF1	523 aa	Known RBP	11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	RPGRIP1	Q96KN7	1286 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	PRRX2	Q99811	253 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	JPH2	Q9BR39	696 aa	Predicted RBP	11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	GPRC5C	Q9NQ84	441 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	FAM86C1	Q9NVL1	165 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	INPP5F	Q9Y2H2	1132 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	USP15	Q9Y4E8	981 aa	Predicted RBP	11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	PCDHB12	Q9Y5F1	795 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	ZNF318	Q5VUA4	2279 aa		11.15	□□□□□ -0.62
TIMM50-208	ENST00000597552	B4GALT3	O60512	393 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	GLP2R	O95838	553 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	SPATA31C1	P0DKV0	1188 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	RARRES1	P49788	294 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	AFF1	P51825	1210 aa	Known RBP	11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	CAPS	Q13938	189 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	CBX2	Q14781	532 aa	Predicted RBP	11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	NAALADL2	Q58DX5	795 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	PLPP4	Q5VZY2	271 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	KCNT2	Q6UVM3	1135 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	OTUD6A	Q7L8S5	288 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	TMEM173	Q86WV6	379 aa	Predicted RBP	11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	LRRC43	Q8N309	656 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	MICAL1	Q8TDZ2	1067 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	CPB2	Q96IY4	423 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	CCDC43	Q96MW1	224 aa	Known RBP	11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	FOXP1	Q9H334	677 aa	Predicted RBP	11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	TLE6	Q9H808	572 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	POLD4	Q9HCU8	107 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	AGPAT5	Q9NUQ2	364 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	FAM105A	Q9NUU6	356 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	PCDHB6	Q9Y5E3	794 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	TECTA	O75443	2155 aa		11.14	□□□□□ -0.63
TIMM50-208	ENST00000597552	GFRA3	O60609	400 aa		11.13	□□□□□ -0.63
TIMM50-208	ENST00000597552	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
TIMM50-208	ENST00000597552	LYPLA2	O95372	231 aa		11.13	□□□□□ -0.63
TIMM50-208	ENST00000597552	LAG3	P18627	525 aa		11.13	□□□□□ -0.63
TIMM50-208	ENST00000597552	GLRA2	P23416	452 aa		11.13	□□□□□ -0.63
TIMM50-208	ENST00000597552	HOXA11	P31270	313 aa	Predicted RBP	11.13	□□□□□ -0.63
TIMM50-208	ENST00000597552	TOB1	P50616	345 aa	Predicted RBP	11.13	□□□□□ -0.63
TIMM50-208	ENST00000597552	ECM1	Q16610	540 aa		11.13	□□□□□ -0.63
TIMM50-208	ENST00000597552	UBXN11	Q5T124	520 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms