RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 KMT5AQ9NQR1 393 aa15.86■□□□□ 0.13
VRK3-213ENST00000597215 ST3GAL5Q9UNP4 418 aa15.86■□□□□ 0.13
VRK3-213ENST00000597215 MICAL3Q7RTP6 2002 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 ABHD14A-ACY1A0A1B0GW23 586 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 INO80B-WBP1J3KQ70 363 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 CSDE1O75534 798 aaKnown RBP15.85■□□□□ 0.13
VRK3-213ENST00000597215 IDEP14735 1019 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 GAP43P17677 238 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 AFMP43652 599 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 EFNA5P52803 228 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 SMTNP53814 917 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 ASIC1P78348 528 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 IKBKEQ14164 716 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 CNNM4Q6P4Q7 775 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 CHRDL2Q6WN34 429 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 KRBA2Q6ZNG9 492 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 OTOP2Q7RTS6 562 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 CATSPER4Q7RTX7 472 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 MYCT1Q8N699 235 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 ENGASEQ8NFI3 743 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 SPIRE2Q8WWL2 714 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 HERVK_113Q902F9 699 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 PAGE5Q96GU1 130 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 C7orf25Q9BPX7 421 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 MINDY3Q9H8M7 445 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 SEL1LQ9UBV2 794 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 PHLPP2Q6ZVD8 1323 aa15.85■□□□□ 0.13
VRK3-213ENST00000597215 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.84■□□□□ 0.13
VRK3-213ENST00000597215 H0YCG3 227 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 SLC16A4O15374 487 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 ERLIN2O94905 339 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 MYL1P05976 194 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 LIG1P18858 919 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 FGFR4P22455 802 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 MBTD1Q05BQ5 628 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 SNW1Q13573 536 aaKnown RBP15.84■□□□□ 0.13
VRK3-213ENST00000597215 MAPK6Q16659 721 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 TCTN1Q2MV58 587 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 KANK3Q6NY19 840 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 CCDC65Q8IXS2 484 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 GRAMD1CQ8IYS0 662 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 NTPCRQ9BSD7 190 aaKnown RBP15.84■□□□□ 0.13
VRK3-213ENST00000597215 KIFC3Q9BVG8 833 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 PANK4Q9NVE7 773 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 PRMT7Q9NVM4 692 aaPredicted RBP15.84■□□□□ 0.13
VRK3-213ENST00000597215 ARHGAP28Q9P2N2 729 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 ADGRA3Q8IWK6 1321 aa15.84■□□□□ 0.13
VRK3-213ENST00000597215 FRMD3A2A2Y4 597 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 ZBBXA8MT70 800 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 GTPBP6O43824 516 aaPredicted RBP15.83■□□□□ 0.12
VRK3-213ENST00000597215 NR1I2O75469 434 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 SCP2P22307 547 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 NCKAP1LP55160 1127 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 NCBP1Q09161 790 aaKnown RBP15.83■□□□□ 0.12
VRK3-213ENST00000597215 SHHQ15465 462 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 C9orf50Q5SZB4 431 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 SFR1Q86XK3 245 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 FAM178BQ8IXR5 827 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 SLC17A8Q8NDX2 589 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 RNPC3Q96LT9 517 aaKnown RBP15.83■□□□□ 0.12
VRK3-213ENST00000597215 PRIMPOLQ96LW4 560 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 TIGD1Q96MW7 591 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 BLZF1Q9H2G9 400 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 PRO3102Q9H379 93 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 TMX1Q9H3N1 280 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 TMEM134Q9H6X4 195 aa15.83■□□□□ 0.12
VRK3-213ENST00000597215 DENND3A2RUS2 1198 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 K7ENM7 598 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 K7ERI5 159 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 TRAK2O60296 914 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 KINO60870 393 aaKnown RBP15.82■□□□□ 0.12
VRK3-213ENST00000597215 PRKCBP05771 671 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 MAPTP10636 758 aaKnown RBP15.82■□□□□ 0.12
VRK3-213ENST00000597215 ZSCAN20P17040 1043 aaPredicted RBP15.82■□□□□ 0.12
VRK3-213ENST00000597215 AXLP30530 894 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 ABCD1P33897 745 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 KCNJ6P48051 423 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 COASYQ13057 564 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 CUL4BQ13620 913 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 FAM187BQ17R55 369 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 HERC4Q5GLZ8 1057 aaPredicted RBP15.82■□□□□ 0.12
VRK3-213ENST00000597215 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 UNC13DQ70J99 1090 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 TDHQ8IZJ6 230 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 TMEM161BQ8NDZ6 487 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 CCDC113Q9H0I3 377 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 FZD8Q9H461 694 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 CHST12Q9NRB3 414 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 OLFML3Q9NRN5 406 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 LMBRD1Q9NUN5 540 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 AGPAT5Q9NUQ2 364 aa15.82■□□□□ 0.12
VRK3-213ENST00000597215 HOOK1Q9UJC3 728 aaKnown RBP15.82■□□□□ 0.12
VRK3-213ENST00000597215 PIN4Q9Y237 131 aaKnown RBP15.82■□□□□ 0.12
VRK3-213ENST00000597215 PVALEFA0A1B0GWK0 134 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 RBAK-RBAKDNI3L0D1 243 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 TSPAN1O60635 241 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 CASP1P29466 404 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 WDR5P61964 334 aaKnown RBP15.81■□□□□ 0.12
VRK3-213ENST00000597215 STRN3Q13033 797 aa15.81■□□□□ 0.12
VRK3-213ENST00000597215 DSC3Q14574 896 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms