RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 THNSL1Q8IYQ7 743 aa14.55□□□□□ -0.08
LIG1-212ENST00000596549 ABI1Q8IZP0 508 aa14.55□□□□□ -0.08
LIG1-212ENST00000596549 ASAP3Q8TDY4 903 aa14.55□□□□□ -0.08
LIG1-212ENST00000596549 PIGOQ8TEQ8 1089 aa14.55□□□□□ -0.08
LIG1-212ENST00000596549 TCP11Q8WWU5 503 aa14.55□□□□□ -0.08
LIG1-212ENST00000596549 AAASQ9NRG9 546 aa14.55□□□□□ -0.08
LIG1-212ENST00000596549 ANKEF1Q9NU02 776 aa14.55□□□□□ -0.08
LIG1-212ENST00000596549 PLXNA3P51805 1871 aa14.55□□□□□ -0.08
LIG1-212ENST00000596549 BDP1A6H8Y1 2624 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 B4GALT3O60512 393 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 USO1O60763 962 aaKnown RBP14.54□□□□□ -0.08
LIG1-212ENST00000596549 DGAT1O75907 488 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 SRGAP2CP0DJJ0 459 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 U2AF2P26368 475 aaKnown RBP eCLIP14.54□□□□□ -0.08
LIG1-212ENST00000596549 HOXA11P31270 313 aaPredicted RBP14.54□□□□□ -0.08
LIG1-212ENST00000596549 TECP42680 631 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 NRIP1P48552 1158 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 RBM10P98175 930 aaKnown RBP14.54□□□□□ -0.08
LIG1-212ENST00000596549 PLCB3Q01970 1234 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 CLUL1Q15846 466 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 CSPP1Q1MSJ5 1256 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 POTEGQ6S5H5 508 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 SRGAP1Q7Z6B7 1085 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 TMEM173Q86WV6 379 aaPredicted RBP14.54□□□□□ -0.08
LIG1-212ENST00000596549 CATSPER3Q86XQ3 398 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 IFNLR1Q8IU57 520 aaPredicted RBP14.54□□□□□ -0.08
LIG1-212ENST00000596549 FAM178BQ8IXR5 827 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 SLC39A11Q8N1S5 342 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 VN1R2Q8NFZ6 395 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 MRPS27Q92552 414 aaKnown RBP14.54□□□□□ -0.08
LIG1-212ENST00000596549 TMX3Q96JJ7 454 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 ZNF558Q96NG5 402 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 IGFLR1Q9H665 355 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 MYH15Q9Y2K3 1946 aa14.54□□□□□ -0.08
LIG1-212ENST00000596549 MYH11P35749 1972 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 MBTPS2O43462 519 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 TSPAN1O60635 241 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 ZNF623O75123 536 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 GLRA2P23416 452 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 ARL2P36404 184 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 TOB1P50616 345 aaPredicted RBP14.53□□□□□ -0.08
LIG1-212ENST00000596549 RAB27AP51159 221 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 PTENP60484 403 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 MBTD1Q05BQ5 628 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 ADAM15Q13444 863 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 AMHR2Q16671 573 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 AGMOQ6ZNB7 445 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 RBM23Q86U06 439 aaKnown RBP14.53□□□□□ -0.08
LIG1-212ENST00000596549 EFHBQ8N7U6 833 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 C4orf32Q8N8J7 132 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 MSLNLQ96KJ4 702 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 TBC1D32Q96NH3 1257 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 MRPL9Q9BYD2 267 aaKnown RBP14.53□□□□□ -0.08
LIG1-212ENST00000596549 TUFT1Q9NNX1 390 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 GPRC5CQ9NQ84 441 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 CLEC1BQ9P126 229 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 LZTS1Q9Y250 596 aa14.53□□□□□ -0.08
LIG1-212ENST00000596549 NCOR1O75376 2440 aa14.52□□□□□ -0.08
LIG1-212ENST00000596549 NT5C1B-RDH14C9J2C7 533 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 ASAP2O43150 1006 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 NCK2O43639 380 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 ST18O60284 1047 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 PPM1AP35813 382 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 TRAPPC10P48553 1259 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 NDUFV1P49821 464 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 AFF1P51825 1210 aaKnown RBP14.52□□□□□ -0.09
LIG1-212ENST00000596549 ECM1Q16610 540 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 DUSP6Q16828 381 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 PLPP4Q5VZY2 271 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 BCL7CQ8WUZ0 217 aaPredicted RBP14.52□□□□□ -0.09
LIG1-212ENST00000596549 TCF25Q9BQ70 676 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 POLR3CQ9BUI4 534 aaPredicted RBP14.52□□□□□ -0.09
LIG1-212ENST00000596549 POLR3FQ9H1D9 316 aaPredicted RBP14.52□□□□□ -0.09
LIG1-212ENST00000596549 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 BARX2Q9UMQ3 279 aaPredicted RBP14.52□□□□□ -0.09
LIG1-212ENST00000596549 PCDHB6Q9Y5E3 794 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 PCDHB2Q9Y5E7 798 aa14.52□□□□□ -0.09
LIG1-212ENST00000596549 C2orf16Q68DN1 1984 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 PDCD11Q14690 1871 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 HIDE1A8MVS5 230 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 PER2O15055 1255 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 ZC3H11AO75152 810 aaKnown RBP eCLIP14.51□□□□□ -0.09
LIG1-212ENST00000596549 OFD1O75665 1012 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 ERLIN2O94905 339 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 SKIP12755 728 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 RPA1P27694 616 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
LIG1-212ENST00000596549 BCAR1P56945 870 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 ZP2Q05996 745 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 SMAD4Q13485 552 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 GNL2Q13823 731 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 KCNC3Q14003 757 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 MXD4Q14582 209 aaPredicted RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 PUS10Q3MIT2 529 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 SMG8Q8ND04 991 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 PPP2R3CQ969Q6 453 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 CPB2Q96IY4 423 aa14.51□□□□□ -0.09
LIG1-212ENST00000596549 CCDC43Q96MW1 224 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 EIF2AQ9BY44 585 aaKnown RBP14.51□□□□□ -0.09
LIG1-212ENST00000596549 NFKBIZQ9BYH8 718 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms