RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 CACNB1Q02641 598 aaPredicted RBP9.23□□□□□ -0.93
VRK3-211ENST00000596445 MBTD1Q05BQ5 628 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 NFX1Q12986 1120 aaKnown RBP9.23□□□□□ -0.93
VRK3-211ENST00000596445 TCTN1Q2MV58 587 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 PRPF38BQ5VTL8 546 aaKnown RBP9.23□□□□□ -0.93
VRK3-211ENST00000596445 KANK3Q6NY19 840 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 KRBA2Q6ZNG9 492 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 OTOP2Q7RTS6 562 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 ZBTB8OSQ8IWT0 167 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 MYCT1Q8N699 235 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 CNNM3Q8NE01 707 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 ENGASEQ8NFI3 743 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 DEPTORQ8TB45 409 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 SPIRE2Q8WWL2 714 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 HERVK_113Q902F9 699 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 PAGE5Q96GU1 130 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 CCDC34Q96HJ3 373 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 C7orf25Q9BPX7 421 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 NTPCRQ9BSD7 190 aaKnown RBP9.23□□□□□ -0.93
VRK3-211ENST00000596445 FTHL17Q9BXU8 183 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 TRIM9Q9C026 710 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 PRO3102Q9H379 93 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 MINDY3Q9H8M7 445 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 ERVK-5Q9HDB9 667 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 KMT5AQ9NQR1 393 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 SEL1LQ9UBV2 794 aa9.23□□□□□ -0.93
VRK3-211ENST00000596445 TTC3P53804 2025 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 FRMD3A2A2Y4 597 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 CCDC169A6NNP5 214 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 GOLGA6L22H0YM25 854 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 INO80B-WBP1J3KQ70 363 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 SLC16A4O15374 487 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 NR1I2O75469 434 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 ERLIN2O94905 339 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 LIG1P18858 919 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 SCP2P22307 547 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 FGFR4P22455 802 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 AFMP43652 599 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 ASIC1P78348 528 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 SHHQ15465 462 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 MAPK6Q16659 721 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 FAM187BQ17R55 369 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 C9orf50Q5SZB4 431 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 RASIP1Q5U651 963 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 CHRDL2Q6WN34 429 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 CATSPER4Q7RTX7 472 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 CCDC65Q8IXS2 484 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 GRAMD1CQ8IYS0 662 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 SLC17A8Q8NDX2 589 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 PRIMPOLQ96LW4 560 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 KIFC3Q9BVG8 833 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 CCDC113Q9H0I3 377 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 TSPYL2Q9H2G4 693 aaPredicted RBP9.22□□□□□ -0.93
VRK3-211ENST00000596445 MTIF3Q9H2K0 278 aaKnown RBP9.22□□□□□ -0.93
VRK3-211ENST00000596445 TMX1Q9H3N1 280 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 FZD8Q9H461 694 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 ZHX3Q9H4I2 956 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 CHST12Q9NRB3 414 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 PANK4Q9NVE7 773 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 ARHGAP28Q9P2N2 729 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 PHLPP2Q6ZVD8 1323 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 ADGRA3Q8IWK6 1321 aa9.22□□□□□ -0.93
VRK3-211ENST00000596445 PTPRSQ13332 1948 aa9.21□□□□□ -0.93
VRK3-211ENST00000596445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 PVALEFA0A1B0GWK0 134 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 DENND3A2RUS2 1198 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 H0YCG3 227 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 K7ERI5 159 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 ENPP3O14638 875 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 GTPBP6O43824 516 aaPredicted RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 TRAK2O60296 914 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 KINO60870 393 aaKnown RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 PRKCBP05771 671 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 MAPTP10636 758 aaKnown RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 IDEP14735 1019 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 ZSCAN20P17040 1043 aaPredicted RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 AXLP30530 894 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 HOXA11P31270 313 aaPredicted RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 ABCD1P33897 745 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 KCNJ6P48051 423 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 NCKAP1LP55160 1127 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 WDR5P61964 334 aaKnown RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 NCBP1Q09161 790 aaKnown RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 COASYQ13057 564 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 CUL4BQ13620 913 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 DSC3Q14574 896 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 AMHR2Q16671 573 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 HERC4Q5GLZ8 1057 aaPredicted RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 PPP4R3CPQ6ZMV5 832 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 UNC13DQ70J99 1090 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 HAUS6Q7Z4H7 955 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 RTN4RL1Q86UN2 441 aaPredicted RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 SFR1Q86XK3 245 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 FAM178BQ8IXR5 827 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 TDHQ8IZJ6 230 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 TMEM161BQ8NDZ6 487 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 KCNN1Q92952 543 aa9.21□□□□□ -0.94
VRK3-211ENST00000596445 RNPC3Q96LT9 517 aaKnown RBP9.21□□□□□ -0.94
VRK3-211ENST00000596445 FIZ1Q96SL8 496 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms