RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 PROCA1Q8NCQ7 364 aaPredicted RBP24.64■■□□□ 1.53
SRRM1-222ENST00000596378 SLC16A10Q8TF71 515 aa24.64■■□□□ 1.53
SRRM1-222ENST00000596378 UBE2TQ9NPD8 197 aaPredicted RBP24.64■■□□□ 1.53
SRRM1-222ENST00000596378 GDF3Q9NR23 364 aa24.64■■□□□ 1.53
SRRM1-222ENST00000596378 RNF146Q9NTX7 359 aa24.64■■□□□ 1.53
SRRM1-222ENST00000596378 TELO2Q9Y4R8 837 aa24.64■■□□□ 1.53
SRRM1-222ENST00000596378 COL11A1P12107 1806 aaPredicted RBP24.64■■□□□ 1.53
SRRM1-222ENST00000596378 CCDC66A2RUB6 948 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 RAD51CO43502 376 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 FAM153BP0C7A2 387 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 LMNB1P20700 586 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 SOX10P56693 466 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 FAM153CQ494X1 144 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 INTS8Q75QN2 995 aaKnown RBP24.63■■□□□ 1.53
SRRM1-222ENST00000596378 SLC20A1Q8WUM9 679 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 AP1M1Q9BXS5 423 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 FAM153AQ9UHL3 310 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 MAPTP10636 758 aaKnown RBP24.63■■□□□ 1.53
SRRM1-222ENST00000596378 CAPN2P17655 700 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 TNFRSF8P28908 595 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 PSMC5P62195 406 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 SLFN11Q7Z7L1 901 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 IFT20Q8IY31 132 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 C4orf19Q8IY42 314 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 XXYLT1Q8NBI6 393 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 SLC35G2Q8TBE7 412 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 ARHGEF26Q96DR7 871 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 TMEM59LQ9UK28 342 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 STXBP5LQ9Y2K9 1186 aa24.63■■□□□ 1.53
SRRM1-222ENST00000596378 A0A0A6YYK5 440 aaPredicted RBP24.62■■□□□ 1.53
SRRM1-222ENST00000596378 WDR64B1ANS9 1081 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 TGFB2P61812 414 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 GTF2BQ00403 316 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 MYBPC2Q14324 1141 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 EMBQ6PCB8 327 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 CASKIN2Q8WXE0 1202 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 CNOT7Q9UIV1 285 aaKnown RBP24.62■■□□□ 1.53
SRRM1-222ENST00000596378 INTUQ9ULD6 942 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 ADRB2P07550 413 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 ALCAMQ13740 583 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 ANO5Q75V66 913 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 NT5DC3Q86UY8 548 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 KAT5Q92993 513 aa24.62■■□□□ 1.53
SRRM1-222ENST00000596378 MAP3K20Q9NYL2 800 aaKnown RBP24.62■■□□□ 1.53
SRRM1-222ENST00000596378 CCDC169A6NNP5 214 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 ATP8B3O60423 1300 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 SORBS3O60504 671 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 BUB1BO60566 1050 aaPredicted RBP24.61■■□□□ 1.53
SRRM1-222ENST00000596378 TNFAIP3P21580 790 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 DOCK1Q14185 1865 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 PBKQ96KB5 322 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 THAP2Q9H0W7 228 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 DOCK5Q9H7D0 1870 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 NOC2LQ9Y3T9 749 aaKnown RBP24.61■■□□□ 1.53
SRRM1-222ENST00000596378 ANKRD63C9JTQ0 380 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 CES2O00748 559 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 BACE1P56817 501 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 AFAP1L1Q8TED9 768 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 CAVIN3Q969G5 261 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 SAAL1Q96ER3 474 aa24.61■■□□□ 1.53
SRRM1-222ENST00000596378 GUCY2FP51841 1108 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 JAK3P52333 1124 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 HMGCS2P54868 508 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 NCKAP1LP55160 1127 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 TNNC1P63316 161 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 SP4Q02446 784 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 KIF22Q14807 665 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 EPC2Q52LR7 807 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 SNRNP48Q6IEG0 339 aaKnown RBP24.6■■□□□ 1.53
SRRM1-222ENST00000596378 CBWD2Q8IUF1 395 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 WRNIP1Q96S55 665 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 KIAA1217Q5T5P2 1943 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 NCANO14594 1321 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 TMEM253P0C7T8 217 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 RPS12P25398 132 aaKnown RBP24.6■■□□□ 1.53
SRRM1-222ENST00000596378 KRT76Q01546 638 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 C12orf56Q8IXR9 622 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 ACTRT1Q8TDG2 376 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 LMBR1Q8WVP7 490 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 CTNNBL1Q8WYA6 563 aaPredicted RBP24.6■■□□□ 1.53
SRRM1-222ENST00000596378 RFFLQ8WZ73 363 aa24.6■■□□□ 1.53
SRRM1-222ENST00000596378 WDR81Q562E7 1941 aa24.59■■□□□ 1.53
SRRM1-222ENST00000596378 NR3C2P08235 984 aa24.59■■□□□ 1.53
SRRM1-222ENST00000596378 ADSSP30520 456 aa24.59■■□□□ 1.53
SRRM1-222ENST00000596378 SCYL3Q8IZE3 742 aa24.59■■□□□ 1.53
SRRM1-222ENST00000596378 SCFD2Q8WU76 684 aa24.59■■□□□ 1.53
SRRM1-222ENST00000596378 BSNDQ8WZ55 320 aa24.59■■□□□ 1.53
SRRM1-222ENST00000596378 TMEM117Q9H0C3 514 aa24.59■■□□□ 1.53
SRRM1-222ENST00000596378 SUCLA2Q9P2R7 463 aaPredicted RBP24.59■■□□□ 1.53
SRRM1-222ENST00000596378 BRCA1P38398 1863 aaKnown RBP24.59■■□□□ 1.53
SRRM1-222ENST00000596378 RLFQ13129 1914 aa24.59■■□□□ 1.53
SRRM1-222ENST00000596378 PGRMC1O00264 195 aaKnown RBP24.58■■□□□ 1.53
SRRM1-222ENST00000596378 ITGA4P13612 1032 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 ZSCAN26Q16670 478 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 AGPAT1Q99943 283 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 DDX47Q9H0S4 455 aaKnown RBP24.58■■□□□ 1.53
SRRM1-222ENST00000596378 PTPRAP18433 802 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 SFNP31947 248 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 USP8P40818 1118 aa24.58■■□□□ 1.53
SRRM1-222ENST00000596378 NPTX2P47972 431 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms