RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-205ENST00000595081 FAM117BQ6P1L5 589 aa25.3■■□□□ 1.64
PNKP-205ENST00000595081 HERC6Q8IVU3 1022 aa25.3■■□□□ 1.64
PNKP-205ENST00000595081 IQUBQ8NA54 791 aa25.3■■□□□ 1.64
PNKP-205ENST00000595081 PHOSPHO2Q8TCD6 241 aa25.3■■□□□ 1.64
PNKP-205ENST00000595081 STAMQ92783 540 aa25.3■■□□□ 1.64
PNKP-205ENST00000595081 PTPRSQ13332 1948 aa25.29■■□□□ 1.64
PNKP-205ENST00000595081 CCDC169A6NNP5 214 aa25.29■■□□□ 1.64
PNKP-205ENST00000595081 DMP1Q13316 513 aaPredicted RBP25.29■■□□□ 1.64
PNKP-205ENST00000595081 DYMQ7RTS9 669 aa25.29■■□□□ 1.64
PNKP-205ENST00000595081 ZBTB8OSQ8IWT0 167 aa25.29■■□□□ 1.64
PNKP-205ENST00000595081 FSIP1Q8NA03 581 aa25.29■■□□□ 1.64
PNKP-205ENST00000595081 RGS18Q9NS28 235 aa25.29■■□□□ 1.64
PNKP-205ENST00000595081 AGPAT5Q9NUQ2 364 aa25.29■■□□□ 1.64
PNKP-205ENST00000595081 ODF2LQ9ULJ1 636 aa25.29■■□□□ 1.64
PNKP-205ENST00000595081 PIN4Q9Y237 131 aaKnown RBP25.29■■□□□ 1.64
PNKP-205ENST00000595081 A0A1W2PQ27 194 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 A0A1W2PQ64 194 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 A0A1W2PQD8 194 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 ERLIN2O94905 339 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 UPP2O95045 317 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 PLS3P13797 630 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 ZSCAN20P17040 1043 aaPredicted RBP25.28■■□□□ 1.64
PNKP-205ENST00000595081 PBX2P40425 430 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 DDX12PQ92771 950 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 LRCH3Q96II8 777 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 C2orf40Q9H1Z8 148 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 CUEDC2Q9H467 287 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 GOLPH3LQ9H4A5 285 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 ZHX3Q9H4I2 956 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 HPSEQ9Y251 543 aa25.28■■□□□ 1.64
PNKP-205ENST00000595081 TSPAN1O60635 241 aa25.27■■□□□ 1.64
PNKP-205ENST00000595081 FAM13AO94988 1023 aa25.27■■□□□ 1.64
PNKP-205ENST00000595081 LIG1P18858 919 aa25.27■■□□□ 1.64
PNKP-205ENST00000595081 NDUFA8P51970 172 aa25.27■■□□□ 1.64
PNKP-205ENST00000595081 SMAD3P84022 425 aaKnown RBP25.27■■□□□ 1.64
PNKP-205ENST00000595081 AMHR2Q16671 573 aa25.27■■□□□ 1.64
PNKP-205ENST00000595081 MRPS27Q92552 414 aaKnown RBP25.27■■□□□ 1.64
PNKP-205ENST00000595081 TOP1MTQ969P6 601 aa25.27■■□□□ 1.64
PNKP-205ENST00000595081 C17orf75Q9HAS0 396 aa25.27■■□□□ 1.64
PNKP-205ENST00000595081 KMT5AQ9NQR1 393 aa25.27■■□□□ 1.64
PNKP-205ENST00000595081 FAM237AA0A1B0GTK4 181 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 C9IYK1 514 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 SLC16A4O15374 487 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 B4GALT5O43286 388 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 TBCAO75347 108 aaKnown RBP25.26■■□□□ 1.63
PNKP-205ENST00000595081 GJB5O95377 273 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 MYOGP15173 224 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 HOXA11P31270 313 aaPredicted RBP25.26■■□□□ 1.63
PNKP-205ENST00000595081 CPB2Q96IY4 423 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 ZBED2Q9BTP6 218 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 PBX4Q9BYU1 374 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 CCDC113Q9H0I3 377 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 TNMDQ9H2S6 317 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 CHST12Q9NRB3 414 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 C1orf112Q9NSG2 853 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 KBTBD4Q9NVX7 518 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 SERTAD1Q9UHV2 236 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 USP20Q9Y2K6 914 aa25.26■■□□□ 1.63
PNKP-205ENST00000595081 SARSP49591 514 aaKnown RBP25.25■■□□□ 1.63
PNKP-205ENST00000595081 ZNF131P52739 623 aa25.25■■□□□ 1.63
PNKP-205ENST00000595081 TWF2Q6IBS0 349 aaKnown RBP25.25■■□□□ 1.63
PNKP-205ENST00000595081 FAM43BQ6ZT52 329 aaPredicted RBP25.25■■□□□ 1.63
PNKP-205ENST00000595081 SLC24A5Q71RS6 500 aa25.25■■□□□ 1.63
PNKP-205ENST00000595081 MYCT1Q8N699 235 aa25.25■■□□□ 1.63
PNKP-205ENST00000595081 SPIRE2Q8WWL2 714 aa25.25■■□□□ 1.63
PNKP-205ENST00000595081 DNAJC19Q96DA6 116 aa25.25■■□□□ 1.63
PNKP-205ENST00000595081 FZD8Q9H461 694 aa25.25■■□□□ 1.63
PNKP-205ENST00000595081 PARVGQ9HBI0 331 aa25.25■■□□□ 1.63
PNKP-205ENST00000595081 ARHGAP28Q9P2N2 729 aa25.25■■□□□ 1.63
PNKP-205ENST00000595081 YBX2Q9Y2T7 364 aaKnown RBP25.25■■□□□ 1.63
PNKP-205ENST00000595081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.24■■□□□ 1.63
PNKP-205ENST00000595081 GOLGA6L4A6NEF3 574 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 TTLL13PA6NNM8 815 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 ACTN4O43707 911 aaKnown RBP25.24■■□□□ 1.63
PNKP-205ENST00000595081 EDN1P05305 212 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 PRKCBP05771 671 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 ARF4P18085 180 aaPredicted RBP25.24■■□□□ 1.63
PNKP-205ENST00000595081 SYKP43405 635 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 EFNA5P52803 228 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 PCBP1Q15365 356 aaKnown RBP eCLIP25.24■■□□□ 1.63
PNKP-205ENST00000595081 MAPK6Q16659 721 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 PYM1Q9BRP8 204 aaKnown RBP25.24■■□□□ 1.63
PNKP-205ENST00000595081 PRMT7Q9NVM4 692 aaPredicted RBP25.24■■□□□ 1.63
PNKP-205ENST00000595081 DACT1Q9NYF0 836 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 LARSQ9P2J5 1176 aaKnown RBP25.24■■□□□ 1.63
PNKP-205ENST00000595081 TTC3P53804 2025 aa25.24■■□□□ 1.63
PNKP-205ENST00000595081 TLL1O43897 1013 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 DNAJB2P25686 324 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 LONRF3Q496Y0 759 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 PPP4R3CPQ6ZMV5 832 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 NPAS4Q8IUM7 802 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 GRAMD1CQ8IYS0 662 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 CEP57L1Q8IYX8 460 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 CRIPAKQ8N1N5 446 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 NTPCRQ9BSD7 190 aaKnown RBP25.23■■□□□ 1.63
PNKP-205ENST00000595081 MAGEF1Q9HAY2 307 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 PCDHA11Q9Y5I1 949 aa25.23■■□□□ 1.63
PNKP-205ENST00000595081 MYH11P35749 1972 aa25.22■■□□□ 1.63
PNKP-205ENST00000595081 PHLPP2Q6ZVD8 1323 aa25.22■■□□□ 1.63
PNKP-205ENST00000595081 K7ERI5 159 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms