RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 USP50Q70EL3 339 aaPredicted RBP16.7■□□□□ 0.26
PNKP-204ENST00000594661 CCT8L2Q96SF2 557 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 KCTD10Q9H3F6 313 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 NDST4Q9H3R1 872 aa16.7■□□□□ 0.26
PNKP-204ENST00000594661 ZNHIT6Q9NWK9 470 aaKnown RBP16.7■□□□□ 0.26
PNKP-204ENST00000594661 LOC285556D6RIA3 1793 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 TESPA1A2RU30 521 aaPredicted RBP16.69■□□□□ 0.26
PNKP-204ENST00000594661 ATP9AO75110 1047 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 PPP1R37O75864 691 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 RPSAP08865 295 aaKnown RBP16.69■□□□□ 0.26
PNKP-204ENST00000594661 ZBED6P86452 979 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 SLMAPQ14BN4 828 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 CAPRIN2Q6IMN6 1127 aaKnown RBP16.69■□□□□ 0.26
PNKP-204ENST00000594661 MIS18BP1Q6P0N0 1132 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 C3orf20Q8ND61 904 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 OTUD5Q96G74 571 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 NACC1Q96RE7 527 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 ACAD9Q9H845 621 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 CYP39A1Q9NYL5 469 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 TBCAO75347 108 aaKnown RBP16.69■□□□□ 0.26
PNKP-204ENST00000594661 ZMYND10O75800 440 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 SMNDC1O75940 238 aaKnown RBP eCLIP16.69■□□□□ 0.26
PNKP-204ENST00000594661 MEA1Q16626 185 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 SND1Q7KZF4 910 aaKnown RBP eCLIP16.69■□□□□ 0.26
PNKP-204ENST00000594661 BZW1Q7L1Q6 419 aaKnown RBP16.69■□□□□ 0.26
PNKP-204ENST00000594661 HAUS2Q9NVX0 235 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 SAR1BQ9Y6B6 198 aa16.69■□□□□ 0.26
PNKP-204ENST00000594661 SFI1A8K8P3 1242 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 TRAF5O00463 557 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 AHCYL1O43865 530 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 FESP07332 822 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 NR3C2P08235 984 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 MYBP10242 640 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 PEX19P40855 299 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 FKBP3Q00688 224 aaKnown RBP16.68■□□□□ 0.26
PNKP-204ENST00000594661 LACTB2Q53H82 288 aaPredicted RBP16.68■□□□□ 0.26
PNKP-204ENST00000594661 FIGNQ5HY92 759 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
PNKP-204ENST00000594661 VSIG10LQ86VR7 867 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 NEK9Q8TD19 979 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 RNPC3Q96LT9 517 aaKnown RBP16.68■□□□□ 0.26
PNKP-204ENST00000594661 CORO1CQ9ULV4 474 aaPredicted RBP16.68■□□□□ 0.26
PNKP-204ENST00000594661 TRPC6Q9Y210 931 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 REXO2Q9Y3B8 237 aaKnown RBP16.68■□□□□ 0.26
PNKP-204ENST00000594661 LCTP09848 1927 aa16.68■□□□□ 0.26
PNKP-204ENST00000594661 A0A0G2JMZ2 1700 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 A0A1W2PQJ5 194 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 LIN7AO14910 233 aaPredicted RBP16.67■□□□□ 0.26
PNKP-204ENST00000594661 CCND2P30279 289 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 HOXD13P35453 343 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 ACCSLQ4AC99 568 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 ANKRD20A8PQ5CZ79 823 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 CRELD2Q6UXH1 353 aaPredicted RBP16.67■□□□□ 0.26
PNKP-204ENST00000594661 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 KLHL23Q8NBE8 558 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 TBC1D22BQ9NU19 505 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 A0A0G2JLL6 359 aaPredicted RBP16.67■□□□□ 0.26
PNKP-204ENST00000594661 DNM1LO00429 736 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 PPATQ06203 517 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 PRRT2Q7Z6L0 340 aaPredicted RBP16.67■□□□□ 0.26
PNKP-204ENST00000594661 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
PNKP-204ENST00000594661 IQCDQ96DY2 449 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 FAM207AQ9NSI2 230 aaPredicted RBP16.67■□□□□ 0.26
PNKP-204ENST00000594661 BTBD7Q9P203 1132 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 SIK3Q9Y2K2 1263 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 COL4A3BPQ9Y5P4 624 aa16.67■□□□□ 0.26
PNKP-204ENST00000594661 DNAJC8O75937 253 aaPredicted RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 CCNE2O96020 404 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 P4HBP07237 508 aaKnown RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 TTLL12Q14166 644 aaPredicted RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 XRRA1Q6P2D8 792 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 LBX2Q6XYB7 198 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 ANKRD13AQ8IZ07 590 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 NSUN6Q8TEA1 469 aaKnown RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 CAVIN3Q969G5 261 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 SPAG5Q96R06 1193 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 OSBPL7Q9BZF2 842 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 MMRN2Q9H8L6 949 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 GLTPD2A6NH11 291 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 HSF2BPO75031 334 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 RGS20O76081 388 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 FAM13AO94988 1023 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 RTN3O95197 1032 aaPredicted RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 CYLC1P35663 651 aaPredicted RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 ATP1A2P50993 1020 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 APBA1Q02410 837 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 SNX1Q13596 522 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 GPR162Q16538 588 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 UGCGQ16739 394 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 EAPPQ56P03 285 aaPredicted RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 EMBQ6PCB8 327 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 ERO1BQ86YB8 467 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 C1orf131Q8NDD1 294 aaKnown RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 NSMCE1Q8WV22 266 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 P3H4Q92791 437 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 INPP4AQ96PE3 977 aaPredicted RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 RUFY1Q96T51 708 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 NHEJ1Q9H9Q4 299 aaPredicted RBP16.66■□□□□ 0.26
PNKP-204ENST00000594661 OLFML3Q9NRN5 406 aa16.66■□□□□ 0.26
PNKP-204ENST00000594661 GUCA1BQ9UMX6 200 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms