RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 CNNM3Q8NE01 707 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 HELQQ8TDG4 1101 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 MICAL1Q8TDZ2 1067 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 TRAIPQ9BWF2 469 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 AGPAT5Q9NUQ2 364 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 PUF60Q9UHX1 559 aaKnown RBP19.26■□□□□ 0.67
IRF3-208ENST00000594387 KIAA1024Q9UPX6 916 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 DNM3Q9UQ16 869 aa19.26■□□□□ 0.67
IRF3-208ENST00000594387 BMP15O95972 392 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 LINC00271P0C7V0 271 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 ARL2P36404 184 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 KRT17Q04695 432 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 CUL4AQ13619 759 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 GLB1LQ6UWU2 654 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 ZBTB8OSQ8IWT0 167 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 IGSF22Q8N9C0 903 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 ZNF558Q96NG5 402 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 CASD1Q96PB1 797 aa19.25■□□□□ 0.67
IRF3-208ENST00000594387 COL25A1Q9BXS0 654 aaPredicted RBP19.25■□□□□ 0.67
IRF3-208ENST00000594387 CHD9Q3L8U1 2897 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 LRRIQ4A6NIV6 560 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 ZNF623O75123 536 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 CSPG5O95196 566 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 ITGB1P05556 798 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 PPM1AP35813 382 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 UBE3AQ05086 875 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 RNASELQ05823 741 aaKnown RBP19.24■□□□□ 0.67
IRF3-208ENST00000594387 BMS1Q14692 1282 aaKnown RBP19.24■□□□□ 0.67
IRF3-208ENST00000594387 PPP2R5AQ15172 486 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 TMEM132AQ24JP5 1023 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 NOTUMQ6P988 496 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 ZNF598Q86UK7 904 aaKnown RBP19.24■□□□□ 0.67
IRF3-208ENST00000594387 HACE1Q8IYU2 909 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 COLGALT1Q8NBJ5 622 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 SPPL3Q8TCT6 385 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 URGCPQ8TCY9 931 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 ASAP3Q8TDY4 903 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 POF1BQ8WVV4 589 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 CDK5RAP3Q96JB5 506 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 IFT74Q96LB3 600 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 TRIM6Q9C030 488 aaPredicted RBP19.24■□□□□ 0.67
IRF3-208ENST00000594387 C2orf40Q9H1Z8 148 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 MINDY3Q9H8M7 445 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 DDX19AQ9NUU7 478 aaKnown RBP19.24■□□□□ 0.67
IRF3-208ENST00000594387 PCDHB2Q9Y5E7 798 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 COL6A3P12111 3177 aa19.24■□□□□ 0.67
IRF3-208ENST00000594387 CYP11B2P19099 503 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 GLRA2P23416 452 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 ALDH7A1P49419 539 aaKnown RBP19.23■□□□□ 0.67
IRF3-208ENST00000594387 ATP2C1P98194 919 aaPredicted RBP19.23■□□□□ 0.67
IRF3-208ENST00000594387 TFF2Q03403 129 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 CAPSQ13938 189 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 ZRSR1Q15695 479 aaKnown RBP19.23■□□□□ 0.67
IRF3-208ENST00000594387 TCEAL5Q5H9L2 206 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 ARL6IP4Q66PJ3 421 aaKnown RBP19.23■□□□□ 0.67
IRF3-208ENST00000594387 IFNLR1Q8IU57 520 aaPredicted RBP19.23■□□□□ 0.67
IRF3-208ENST00000594387 CCDC51Q96ER9 411 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 INTS4Q96HW7 963 aaKnown RBP19.23■□□□□ 0.67
IRF3-208ENST00000594387 FAM193BQ96PV7 902 aaPredicted RBP19.23■□□□□ 0.67
IRF3-208ENST00000594387 NFKBIZQ9BYH8 718 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 NT5C3AQ9H0P0 336 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 BHMT2Q9H2M3 363 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 CWH43Q9H720 699 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 UBE2ZQ9H832 354 aaPredicted RBP19.23■□□□□ 0.67
IRF3-208ENST00000594387 UBN1Q9NPG3 1134 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 MYO7AQ13402 2215 aa19.23■□□□□ 0.67
IRF3-208ENST00000594387 VWA3AA6NCI4 1184 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 K7ELQ4 463 aaPredicted RBP19.22■□□□□ 0.67
IRF3-208ENST00000594387 FGF18O76093 207 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 LONRF3Q496Y0 759 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 CLLU1OSQ5K130 101 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 PDE12Q6L8Q7 609 aaKnown RBP19.22■□□□□ 0.67
IRF3-208ENST00000594387 KCNT2Q6UVM3 1135 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 KCTD17Q8N5Z5 321 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 DEPTORQ8TB45 409 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 SPG21Q9NZD8 308 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 KANSL3Q9P2N6 904 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 INPP5FQ9Y2H2 1132 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 CNTNAP2Q9UHC6 1331 aa19.22■□□□□ 0.67
IRF3-208ENST00000594387 EYA4O95677 639 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 HSP90AA1P07900 732 aaKnown RBP19.21■□□□□ 0.67
IRF3-208ENST00000594387 ITGA4P13612 1032 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 NOMO2Q5JPE7 1267 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 KIFAP3Q92845 792 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 LPPQ93052 612 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 PABPC5Q96DU9 382 aaKnown RBP19.21■□□□□ 0.67
IRF3-208ENST00000594387 IGFLR1Q9H665 355 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 GPRC5CQ9NQ84 441 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 TLR9Q9NR96 1032 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 PRMT7Q9NVM4 692 aaPredicted RBP19.21■□□□□ 0.67
IRF3-208ENST00000594387 CLDND1Q9NY35 253 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 FAM50BQ9Y247 325 aa19.21■□□□□ 0.67
IRF3-208ENST00000594387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.2■□□□□ 0.66
IRF3-208ENST00000594387 TSPAN1O60635 241 aa19.2■□□□□ 0.66
IRF3-208ENST00000594387 ATF7P17544 494 aaPredicted RBP19.2■□□□□ 0.66
IRF3-208ENST00000594387 KCNA5P22460 613 aa19.2■□□□□ 0.66
IRF3-208ENST00000594387 MBTD1Q05BQ5 628 aa19.2■□□□□ 0.66
IRF3-208ENST00000594387 PUS10Q3MIT2 529 aaKnown RBP19.2■□□□□ 0.66
IRF3-208ENST00000594387 HSCBQ8IWL3 235 aa19.2■□□□□ 0.66
IRF3-208ENST00000594387 MRPS27Q92552 414 aaKnown RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms