RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FOXN3O00409 490 aaPredicted RBP17.85■□□□□ 0.45
LIG1-206ENST00000594067 STAT2P52630 851 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 AGBL2Q5U5Z8 902 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 MAEAQ7L5Y9 396 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 SYCP3Q8IZU3 236 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 SEC14L1Q92503 715 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 UNC45AQ9H3U1 944 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 TMOD4Q9NZQ9 345 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 TTC7AQ9ULT0 858 aaPredicted RBP17.85■□□□□ 0.45
LIG1-206ENST00000594067 ATP8A1Q9Y2Q0 1164 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 C5orf60A6NFR6 353 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 ARP10275 920 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 ZNF131P52739 623 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 KRT71Q3SY84 523 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 KCTD17Q8N5Z5 321 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 ACER1Q8TDN7 264 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 ATP8B4Q8TF62 1192 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 RAPGEF5Q92565 580 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 NACC1Q96RE7 527 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 CSRNP1Q96S65 589 aa17.85■□□□□ 0.45
LIG1-206ENST00000594067 ACTR5Q9H9F9 607 aaPredicted RBP17.85■□□□□ 0.45
LIG1-206ENST00000594067 PAEPP09466 180 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 POLR2MP0CAP2 368 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 BYSLQ13895 437 aaKnown RBP17.84■□□□□ 0.45
LIG1-206ENST00000594067 AADACL2Q6P093 401 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 STXBP4Q6ZWJ1 553 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 SLC20A1Q8WUM9 679 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 MASTLQ96GX5 879 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 SEC16BQ96JE7 1060 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 CCDC114Q96M63 670 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 ZNF577Q9BSK1 485 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 PCIF1Q9H4Z3 704 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 SEL1LQ9UBV2 794 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 BACH1O14867 736 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 PTENP60484 403 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 MAGOHP61326 146 aaKnown RBP17.84■□□□□ 0.45
LIG1-206ENST00000594067 DLG4P78352 724 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 BFSP1Q12934 665 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 GLG1Q92896 1179 aa17.84■□□□□ 0.45
LIG1-206ENST00000594067 MAGOHBQ96A72 148 aaKnown RBP17.84■□□□□ 0.45
LIG1-206ENST00000594067 TISP43B9A030 160 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 DDX39AO00148 427 aaKnown RBP17.83■□□□□ 0.44
LIG1-206ENST00000594067 HIP1RO75146 1068 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 PDE6BP35913 854 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 DR1Q01658 176 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 PPP2R5AQ15172 486 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 CEP55Q53EZ4 464 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 ALG3Q92685 438 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 FMO2Q99518 471 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 LXNQ9BS40 222 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 UBE4BO95155 1302 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 ANKRD62A6NC57 917 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 CCDC172P0C7W6 258 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 ANKRD20A8PQ5CZ79 823 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 AGPAT1Q99943 283 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 RAB17Q9H0T7 212 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 CARD9Q9H257 536 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 SERPINA10Q9UK55 444 aa17.83■□□□□ 0.44
LIG1-206ENST00000594067 AFF2P51816 1311 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 GOLGA6L7A0A1B0GV03 622 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 ARHGEF35A5YM69 484 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 TMEM110-MUSTN1A8MSY1 372 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 TULP1O00294 542 aaPredicted RBP17.82■□□□□ 0.44
LIG1-206ENST00000594067 ONECUT3O60422 494 aaPredicted RBP17.82■□□□□ 0.44
LIG1-206ENST00000594067 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
LIG1-206ENST00000594067 IFFO1Q0D2I5 559 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 RPAINQ86UA6 219 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 FUKQ8N0W3 1084 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 LMO3Q8TAP4 145 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 PRMT6Q96LA8 375 aaPredicted RBP17.82■□□□□ 0.44
LIG1-206ENST00000594067 UBE2TQ9NPD8 197 aaPredicted RBP17.82■□□□□ 0.44
LIG1-206ENST00000594067 PKD2L1Q9P0L9 805 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 CHORDC1Q9UHD1 332 aaPredicted RBP17.82■□□□□ 0.44
LIG1-206ENST00000594067 ODF2LQ9ULJ1 636 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 DAAM1Q9Y4D1 1078 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 KIF22Q14807 665 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 DAW1Q8N136 415 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 NLGN1Q8N2Q7 840 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 TATDN2Q93075 761 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 ERP44Q9BS26 406 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.82■□□□□ 0.44
LIG1-206ENST00000594067 GOPCQ9HD26 462 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 CTTNBP2NLQ9P2B4 639 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 DIS3Q9Y2L1 958 aaKnown RBP17.82■□□□□ 0.44
LIG1-206ENST00000594067 ALG6Q9Y672 507 aa17.82■□□□□ 0.44
LIG1-206ENST00000594067 EMSYQ7Z589 1322 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 GOLGB1Q14789 3259 aaKnown RBP17.81■□□□□ 0.44
LIG1-206ENST00000594067 K7ENM7 598 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 MAPK7Q13164 816 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 ZYXQ15942 572 aaKnown RBP17.81■□□□□ 0.44
LIG1-206ENST00000594067 DUPD1Q68J44 220 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 COL23A1Q86Y22 540 aaPredicted RBP17.81■□□□□ 0.44
LIG1-206ENST00000594067 ARHGEF19Q8IW93 802 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.81■□□□□ 0.442e-7■■■■■ 129.7
LIG1-206ENST00000594067 SNX24Q9Y343 169 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 GOLGA6L10A0A0M3HER8 536 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 MMP10P09238 476 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 KRT13P13646 458 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 CDR1P51861 262 aa17.81■□□□□ 0.44
LIG1-206ENST00000594067 PREPLQ4J6C6 727 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms