RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 SUGCTQ9HAC7 445 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 AGPAT3Q9NRZ7 376 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 ARHGAP28Q9P2N2 729 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 Q9Y3F1 56 aa14.49□□□□□ -0.09
VRK3-205ENST00000593919 KIF2AO00139 706 aaPredicted RBP14.48□□□□□ -0.09
VRK3-205ENST00000593919 CCP110O43303 1012 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 ELNP15502 786 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 NAMPTP43490 491 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 CPT1AP50416 773 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 MKRN4PQ13434 485 aaPredicted RBP14.48□□□□□ -0.09
VRK3-205ENST00000593919 PPP2R5AQ15172 486 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 ZNF484Q5JVG2 852 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 MIIPQ5JXC2 388 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 EXOC8Q8IYI6 725 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 KIF18AQ8NI77 898 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 TBX20Q9UMR3 447 aa14.48□□□□□ -0.09
VRK3-205ENST00000593919 LRRIQ4A6NIV6 560 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 LGALS16A8MUM7 142 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 TISP43B9A030 160 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 PES1O00541 588 aaKnown RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 ARHGAP6O43182 974 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 CTIFO43310 598 aaKnown RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 DUSP11O75319 330 aaKnown RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 C22orf31O95567 290 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 F2P00734 622 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 RPL13P26373 211 aaKnown RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 HOXD10P28358 340 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 PBX1P40424 430 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 BEX3Q00994 111 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 CACNB2Q08289 660 aaPredicted RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 CAPSQ13938 189 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 NFIL3Q16649 462 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 CCDC40Q4G0X9 1142 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 IER5Q5VY09 327 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 SYT10Q6XYQ8 523 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 MAP4K3Q8IVH8 894 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 TCP11Q8WWU5 503 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 PRPF31Q8WWY3 499 aaKnown RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 HVCN1Q96D96 273 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 JPH2Q9BR39 696 aaPredicted RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 NOC4LQ9BVI4 516 aaKnown RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 AP5M1Q9H0R1 490 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 COL1A2P08123 1366 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 AKR1B15C9JRZ8 316 aaPredicted RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 GNA14O95837 355 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 CNGA1P29973 690 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 CASP4P49662 377 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 CLCN3P51790 818 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 MARSP56192 900 aaKnown RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 UBXN1Q04323 297 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 TAS1R3Q7RTX0 852 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 PPFIBP1Q86W92 1011 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 METTL13Q8N6R0 699 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 GOLGA5Q8TBA6 731 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 CPLX3Q8WVH0 158 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 PSPC1Q8WXF1 523 aaKnown RBP14.47□□□□□ -0.09
VRK3-205ENST00000593919 KAT2BQ92831 832 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 SAGE1Q9NXZ1 904 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 KCNG1Q9UIX4 513 aa14.47□□□□□ -0.09
VRK3-205ENST00000593919 H0YCG3 227 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 SEPT4O43236 478 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 AKAP3O75969 853 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 PRKAR2AP13861 404 aaKnown RBP14.46□□□□□ -0.09
VRK3-205ENST00000593919 KLRC1P26715 233 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 RBL2Q08999 1139 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 PPFIA1Q13136 1202 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 FSCN1Q16658 493 aaKnown RBP14.46□□□□□ -0.09
VRK3-205ENST00000593919 MAN2A1Q16706 1144 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 BRDTQ58F21 947 aaPredicted RBP14.46□□□□□ -0.09
VRK3-205ENST00000593919 EFCAB12Q6NXP0 572 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 DEPTORQ8TB45 409 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 ZNF296Q8WUU4 475 aaPredicted RBP14.46□□□□□ -0.09
VRK3-205ENST00000593919 EXOC7Q9UPT5 735 aa14.46□□□□□ -0.09
VRK3-205ENST00000593919 SCN10AQ9Y5Y9 1956 aa14.46□□□□□ -0.1
VRK3-205ENST00000593919 MYADML2A6NDP7 307 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 ADCY3O60266 1144 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 FKTNO75072 461 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 GJB1P08034 283 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 C6orf222P0C671 652 aaPredicted RBP14.45□□□□□ -0.1
VRK3-205ENST00000593919 CYP2J2P51589 502 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 CHMP4BP1P59074 171 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 LAMTOR4Q0VGL1 99 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 MXD4Q14582 209 aaPredicted RBP14.45□□□□□ -0.1
VRK3-205ENST00000593919 GRIK4Q16099 956 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 KIAA0753Q2KHM9 967 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 TRIM59Q8IWR1 403 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 RETREG2Q8NC44 543 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 ERO1AQ96HE7 468 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 DMAC2Q9NW81 257 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 SLC16A3O15427 465 aaKnown RBP14.45□□□□□ -0.1
VRK3-205ENST00000593919 ZSCAN12O43309 604 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 STX10O60499 249 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 GNRH1P01148 92 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 HMGCRP04035 888 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 EPB41P11171 864 aaKnown RBP14.45□□□□□ -0.1
VRK3-205ENST00000593919 CCND3P30281 292 aaPredicted RBP14.45□□□□□ -0.1
VRK3-205ENST00000593919 ABCD1P33897 745 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 DNM2P50570 870 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 VWA3BQ502W6 1294 aa14.45□□□□□ -0.1
VRK3-205ENST00000593919 TOGARAM2Q6ZUX3 1019 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms