RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SPIRE1Q08AE8 756 aa14.79□□□□□ -0.04
H3F3B-213ENST00000593254 C8orf34Q49A92 452 aa14.79□□□□□ -0.04
H3F3B-213ENST00000593254 ERMP1Q7Z2K6 904 aa14.79□□□□□ -0.04
H3F3B-213ENST00000593254 DIS3L2Q8IYB7 885 aaKnown RBP14.79□□□□□ -0.04
H3F3B-213ENST00000593254 SLFN12Q8IYM2 578 aa14.79□□□□□ -0.04
H3F3B-213ENST00000593254 ZNF668Q96K58 619 aaPredicted RBP14.79□□□□□ -0.04
H3F3B-213ENST00000593254 SH2D3AQ9BRG2 576 aa14.79□□□□□ -0.04
H3F3B-213ENST00000593254 ELAC1Q9H777 363 aaKnown RBP14.79□□□□□ -0.04
H3F3B-213ENST00000593254 TMEM161AQ9NX61 479 aa14.79□□□□□ -0.04
H3F3B-213ENST00000593254 WRAP73Q9P2S5 460 aaPredicted RBP14.79□□□□□ -0.04
H3F3B-213ENST00000593254 LIMCH1Q9UPQ0 1083 aa14.79□□□□□ -0.04
H3F3B-213ENST00000593254 EPG5Q9HCE0 2579 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 BTBD18B2RXH4 712 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 FSCN2O14926 492 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 DKC1O60832 514 aaKnown RBP eCLIP14.78□□□□□ -0.04
H3F3B-213ENST00000593254 IBSPP21815 317 aaPredicted RBP14.78□□□□□ -0.04
H3F3B-213ENST00000593254 DNM2P50570 870 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 ERVFC1P60507 584 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 TRIM29Q14134 588 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 EPHA7Q15375 998 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 FAM102BQ5T8I3 360 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 PLA2G4FQ68DD2 849 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 SYCE2Q6PIF2 218 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 NLRP7Q8WX94 980 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 SCLT1Q96NL6 688 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 CYP26B1Q9NR63 512 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 PCDHB12Q9Y5F1 795 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 GTF3C3Q9Y5Q9 886 aa14.78□□□□□ -0.04
H3F3B-213ENST00000593254 CACNA1BQ00975 2339 aa14.77□□□□□ -0.04
H3F3B-213ENST00000593254 TBKBP1A7MCY6 615 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 MARCH6O60337 910 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 BAG4O95429 457 aaKnown RBP14.77□□□□□ -0.05
H3F3B-213ENST00000593254 ZSCAN20P17040 1043 aaPredicted RBP14.77□□□□□ -0.05
H3F3B-213ENST00000593254 NPEPPSP55786 919 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 PDE12Q6L8Q7 609 aaKnown RBP14.77□□□□□ -0.05
H3F3B-213ENST00000593254 ANKRD54Q6NXT1 300 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 ZNF410Q86VK4 478 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 C4orf19Q8IY42 314 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 TMEM105Q8N8V8 129 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 KREMEN2Q8NCW0 462 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 MICAL1Q8TDZ2 1067 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 KIF2CQ99661 725 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 JPH2Q9BR39 696 aaPredicted RBP14.77□□□□□ -0.05
H3F3B-213ENST00000593254 LXNQ9BS40 222 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 ATP6V0A4Q9HBG4 840 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 SUCLA2Q9P2R7 463 aaPredicted RBP14.77□□□□□ -0.05
H3F3B-213ENST00000593254 PPME1Q9Y570 386 aa14.77□□□□□ -0.05
H3F3B-213ENST00000593254 A0A087WZ62 844 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 WNT7AO00755 349 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 FGF18O76093 207 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 FGFR1P11362 822 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 FGFR4P22455 802 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 FOSBP53539 338 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 NCAPH2Q6IBW4 605 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 CCDC83Q8IWF9 413 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 UBALD2Q8IYN6 164 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 ZNF579Q8NAF0 562 aaKnown RBP14.76□□□□□ -0.05
H3F3B-213ENST00000593254 FDXACB1Q9BRP7 624 aaPredicted RBP14.76□□□□□ -0.05
H3F3B-213ENST00000593254 LLPHQ9BRT6 129 aaKnown RBP14.76□□□□□ -0.05
H3F3B-213ENST00000593254 GCOM2Q9BZD3 368 aaPredicted RBP14.76□□□□□ -0.05
H3F3B-213ENST00000593254 DHX33Q9H6R0 707 aaKnown RBP14.76□□□□□ -0.05
H3F3B-213ENST00000593254 RNF19AQ9NV58 838 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 RGL1Q9NZL6 768 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 SORCS3Q9UPU3 1222 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 NCOR2Q9Y618 2525 aa14.76□□□□□ -0.05
H3F3B-213ENST00000593254 CEP250Q9BV73 2442 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 A0A0U1RQF3 1178 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 HOXA2O43364 376 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 NEMFO60524 1076 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 CSDE1O75534 798 aaKnown RBP14.75□□□□□ -0.05
H3F3B-213ENST00000593254 BRD1O95696 1058 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 SRGAP2BP0DMP2 458 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 YWHABP31946 246 aaKnown RBP14.75□□□□□ -0.05
H3F3B-213ENST00000593254 TECP42680 631 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 MTMR3Q13615 1198 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 CALCRLQ16602 461 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 ZBTB33Q86T24 672 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 ZNF598Q86UK7 904 aaKnown RBP14.75□□□□□ -0.05
H3F3B-213ENST00000593254 ECHDC2Q86YB7 292 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 RHPN2Q8IUC4 686 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 EXOC8Q8IYI6 725 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 SLC7A3Q8WY07 619 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 DYDC2Q96IM9 177 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 CEP170P1Q96L14 293 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 TMEM117Q9H0C3 514 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 CWH43Q9H720 699 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 ZSWIM4Q9H7M6 989 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 AAASQ9NRG9 546 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 TYW1Q9NV66 732 aaKnown RBP14.75□□□□□ -0.05
H3F3B-213ENST00000593254 HCSTQ9UBK5 93 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 PCDHA12Q9UN75 941 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 LZTS1Q9Y250 596 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 NR2E1Q9Y466 385 aa14.75□□□□□ -0.05
H3F3B-213ENST00000593254 TPRP12270 2363 aaKnown RBP14.74□□□□□ -0.05
H3F3B-213ENST00000593254 SLITRK3O94933 977 aa14.74□□□□□ -0.05
H3F3B-213ENST00000593254 HOXB8P17481 243 aaPredicted RBP14.74□□□□□ -0.05
H3F3B-213ENST00000593254 SFPQP23246 707 aaKnown RBP eCLIP14.74□□□□□ -0.05
H3F3B-213ENST00000593254 SP100P23497 879 aaPredicted RBP14.74□□□□□ -0.05
H3F3B-213ENST00000593254 RFC5P40937 340 aa14.74□□□□□ -0.05
H3F3B-213ENST00000593254 POLGP54098 1239 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms