RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 GLB1LQ6UWU2 654 aa14.84□□□□□ -0.03
APOC1-209ENST00000592885 NSUN7Q8NE18 718 aaKnown RBP14.84□□□□□ -0.03
APOC1-209ENST00000592885 PGBD4Q96DM1 585 aa14.84□□□□□ -0.03
APOC1-209ENST00000592885 IFT122Q9HBG6 1241 aa14.84□□□□□ -0.03
APOC1-209ENST00000592885 GJB4Q9NTQ9 266 aa14.84□□□□□ -0.03
APOC1-209ENST00000592885 WRAP73Q9P2S5 460 aaPredicted RBP14.84□□□□□ -0.03
APOC1-209ENST00000592885 STK39Q9UEW8 545 aa14.84□□□□□ -0.03
APOC1-209ENST00000592885 LOC730098B7Z3J9 87 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 PER2O15055 1255 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 CSDE1O75534 798 aaKnown RBP14.83□□□□□ -0.04
APOC1-209ENST00000592885 LYPLA2O95372 231 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 HOXB8P17481 243 aaPredicted RBP14.83□□□□□ -0.04
APOC1-209ENST00000592885 ALDH7A1P49419 539 aaKnown RBP14.83□□□□□ -0.04
APOC1-209ENST00000592885 NR5A1Q13285 461 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 TRIM29Q14134 588 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 EMC2Q15006 297 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 EARS2Q5JPH6 523 aaKnown RBP14.83□□□□□ -0.04
APOC1-209ENST00000592885 VN1R2Q8NFZ6 395 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 SUSD6Q92537 303 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 TMEM169Q96HH4 297 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 MTRQ99707 1265 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 PHF7Q9BWX1 381 aaPredicted RBP14.83□□□□□ -0.04
APOC1-209ENST00000592885 CNTNAP2Q9UHC6 1331 aa14.83□□□□□ -0.04
APOC1-209ENST00000592885 NEMFO60524 1076 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 LARGE1O95461 756 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 PBX3P40426 434 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 BCAR1P56945 870 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 LAMTOR4Q0VGL1 99 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 GIT2Q14161 759 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 MXD4Q14582 209 aaPredicted RBP14.82□□□□□ -0.04
APOC1-209ENST00000592885 CALCRLQ16602 461 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 XKR9Q5GH70 373 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 NOMO2Q5JPE7 1267 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 ANKRD54Q6NXT1 300 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 TMC7Q7Z402 723 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 FERMT3Q86UX7 667 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 RNF135Q8IUD6 432 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 KSR1Q8IVT5 923 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 NECAB1Q8N987 351 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 PRPF31Q8WWY3 499 aaKnown RBP14.82□□□□□ -0.04
APOC1-209ENST00000592885 CASP10Q92851 521 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 DYDC2Q96IM9 177 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 KCNH6Q9H252 994 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 PCDHA12Q9UN75 941 aa14.82□□□□□ -0.04
APOC1-209ENST00000592885 FAM205CA6NFA0 338 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 HIDE1A8MVS5 230 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 ZC3H11AO75152 810 aaKnown RBP eCLIP14.81□□□□□ -0.04
APOC1-209ENST00000592885 NEK4P51957 841 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 POU5F1BQ06416 359 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 MRPL10Q7Z7H8 261 aaKnown RBP14.81□□□□□ -0.04
APOC1-209ENST00000592885 DIS3L2Q8IYB7 885 aaKnown RBP14.81□□□□□ -0.04
APOC1-209ENST00000592885 MRPL43Q8N983 215 aaKnown RBP14.81□□□□□ -0.04
APOC1-209ENST00000592885 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
APOC1-209ENST00000592885 CNNM3Q8NE01 707 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 URGCPQ8TCY9 931 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 TMEM143Q96AN5 459 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 CCDC51Q96ER9 411 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 EIF2AK1Q9BQI3 630 aaKnown RBP14.81□□□□□ -0.04
APOC1-209ENST00000592885 ZBP1Q9H171 429 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 ANKEF1Q9NU02 776 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 TBC1D13Q9NVG8 400 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 RGL1Q9NZL6 768 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 MUTYHQ9UIF7 546 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 PCDHB2Q9Y5E7 798 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 IRAK3Q9Y616 596 aa14.81□□□□□ -0.04
APOC1-209ENST00000592885 C2orf71A6NGG8 1288 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 OFD1O75665 1012 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 DGAT1O75907 488 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 ERLIN2O94905 339 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 SLITRK3O94933 977 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 AXLP30530 894 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 TECP42680 631 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 CYP4A11Q02928 519 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 RNASELQ05823 741 aaKnown RBP14.8□□□□□ -0.04
APOC1-209ENST00000592885 ORC2Q13416 577 aaPredicted RBP14.8□□□□□ -0.04
APOC1-209ENST00000592885 TFDP1Q14186 410 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 CTTNQ14247 550 aaKnown RBP14.8□□□□□ -0.04
APOC1-209ENST00000592885 TPRNQ4KMQ1 711 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 DDX53Q86TM3 631 aaKnown RBP14.8□□□□□ -0.04
APOC1-209ENST00000592885 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
APOC1-209ENST00000592885 TPH2Q8IWU9 490 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 RNF149Q8NC42 400 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 IGSF21Q96ID5 467 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 HSD17B14Q9BPX1 270 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 S1PR5Q9H228 398 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 UBN1Q9NPG3 1134 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 KANSL3Q9P2N6 904 aa14.8□□□□□ -0.04
APOC1-209ENST00000592885 BTBD18B2RXH4 712 aa14.79□□□□□ -0.04
APOC1-209ENST00000592885 SRGAP2CP0DJJ0 459 aa14.79□□□□□ -0.04
APOC1-209ENST00000592885 NCLP19338 710 aaKnown RBP14.79□□□□□ -0.04
APOC1-209ENST00000592885 HOXA11P31270 313 aaPredicted RBP14.79□□□□□ -0.04
APOC1-209ENST00000592885 RBM10P98175 930 aaKnown RBP14.79□□□□□ -0.04
APOC1-209ENST00000592885 ITIH3Q06033 890 aa14.79□□□□□ -0.04
APOC1-209ENST00000592885 SAFBQ15424 915 aaKnown RBP eCLIP14.79□□□□□ -0.04
APOC1-209ENST00000592885 EDAQ92838 391 aa14.79□□□□□ -0.04
APOC1-209ENST00000592885 LPPQ93052 612 aa14.79□□□□□ -0.04
APOC1-209ENST00000592885 CCDC43Q96MW1 224 aaKnown RBP14.79□□□□□ -0.04
APOC1-209ENST00000592885 NECTIN4Q96NY8 510 aa14.79□□□□□ -0.04
APOC1-209ENST00000592885 MTMR9Q96QG7 549 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms