RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 CENPKQ9BS16 269 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MAK16Q9BXY0 300 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 KIAA1586Q9HCI6 787 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 APEX2Q9UBZ4 518 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 DDX20Q9UHI6 824 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 SNX24Q9Y343 169 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 REXO2Q9Y3B8 237 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 ROBO3Q96MS0 1386 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 IQANK1A0A1B0GTG1 560 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 POTEMA6NI47 508 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 F8VZ95 297 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 KIAA0391O15091 583 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 TTI1O43156 1089 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 COQ9O75208 318 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 BRAFP15056 766 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 NQO1P15559 274 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 SKIV2L2P42285 1042 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 GALCP54803 685 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 GRB10Q13322 594 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 GRAPQ13588 217 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 DRAP1Q14919 205 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 PDCD2Q16342 344 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 ERFEQ4G0M1 354 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 MIIPQ5JXC2 388 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 USP17L2Q6R6M4 530 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 EPM2AIP1Q7L775 607 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 MIER3Q7Z3K6 550 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TMC3Q7Z5M5 1100 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 PALM2Q8IXS6 379 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 FUKQ8N0W3 1084 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 ATL2Q8NHH9 583 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 GRAPLQ8TC17 118 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 DHX38Q92620 1227 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 STAMBPL1Q96FJ0 436 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 EEF2KMTQ96G04 330 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 AGPAT1Q99943 283 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TRIM55Q9BYV6 548 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TTYH3Q9C0H2 523 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 INTS2Q9H0H0 1204 aaKnown RBP3.79□□□□□ -1.8
VMP1-216ENST00000592790 SYNCQ9H7C4 482 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 CTNNAL1Q9UBT7 734 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TRPC6Q9Y210 931 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 TRAF3IP3Q9Y228 551 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 SSUH2Q9Y2M2 353 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 CD2APQ9Y5K6 639 aa3.79□□□□□ -1.8
VMP1-216ENST00000592790 FRMPD2Q68DX3 1309 aaPredicted RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 MYH7P12883 1935 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 TNS2Q63HR2 1409 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 A0A087X0T9 212 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 KLHL33A6NCF5 533 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 TJP3O95049 919 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 ATP6V1G2O95670 118 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 FAM228BP0C875 321 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 GZMAP12544 262 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 RPA1P27694 616 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 SEC24CP53992 1094 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 TAP1Q03518 808 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 ZNF844Q08AG5 666 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 XRCC4Q13426 336 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 TMEM119Q4V9L6 283 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 ATG16L1Q676U5 607 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 DCUN1D2Q6PH85 259 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 FOXR1Q6PIV2 292 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 SFR1Q86XK3 245 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 METTL13Q8N6R0 699 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 CFAP61Q8NHU2 1237 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 SLC35G2Q8TBE7 412 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 GFM2Q969S9 779 aaKnown RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 MAGEB18Q96M61 343 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 HINFPQ9BQA5 517 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 POLR3CQ9BUI4 534 aaPredicted RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 FRMD8P1Q9BZ68 369 aaPredicted RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 LTBP4Q8N2S1 1624 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 ZNF233A6NK53 670 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 RASA4BC9J798 803 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 PDE2AO00408 941 aaPredicted RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 RASA4O43374 803 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 C21orf2O43822 256 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 PPFIA2O75334 1257 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 WFS1O76024 890 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 NTSR2O95665 410 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 ATP5BP06576 529 aaKnown RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 KLK7P49862 253 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 KLC1Q07866 573 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 FUT2Q10981 343 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 BFSP1Q12934 665 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 TBCCQ15814 346 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 CERKLQ49MI3 558 aaPredicted RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 ZNF677Q86XU0 584 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 ST13P4Q8IZP2 240 aaPredicted RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 PPM1KQ8N3J5 372 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 NME8Q8N427 588 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 XXYLT1Q8NBI6 393 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 ZNF564Q8TBZ8 553 aaPredicted RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 SH3RF3Q8TEJ3 882 aaPredicted RBP3.78□□□□□ -1.8
VMP1-216ENST00000592790 RSAD2Q8WXG1 361 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 COA7Q96BR5 231 aa3.78□□□□□ -1.8
VMP1-216ENST00000592790 SPDL1Q96EA4 605 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms