RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 TISP43B9A030 160 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 OPA1O60313 960 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 ACTN2P35609 894 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 NCKAP1LP55160 1127 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 HNRNPH2P55795 449 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 DLG4P78352 724 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 XKR9Q5GH70 373 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 XRRA1Q6P2D8 792 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 POTEAQ6S8J7 498 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 KLHL7Q8IXQ5 586 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 METTL13Q8N6R0 699 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 RUFY1Q96T51 708 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.98■□□□□ 0.473e-13■■■□□ 18.9
PRKCSH-217ENST00000592741 SEPT11Q9NVA2 429 aaKnown RBP17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 AMFRQ9UKV5 643 aa17.98■□□□□ 0.47
PRKCSH-217ENST00000592741 VWA5AO00534 786 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 RAD51CO43502 376 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 CLSTN1O94985 981 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 CARSP49589 748 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 PEX3P56589 373 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 ZSCAN26Q16670 478 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 PTPROQ16827 1216 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 FAM102BQ5T8I3 360 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 NT5DC3Q86UY8 548 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 RDM1Q8NG50 284 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 SCFD2Q8WU76 684 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 IFT81Q8WYA0 676 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 NFU1Q9UMS0 254 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 EXOC7Q9UPT5 735 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 NOC2LQ9Y3T9 749 aaKnown RBP17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 DOCK1Q14185 1865 aa17.97■□□□□ 0.47
PRKCSH-217ENST00000592741 TMEM150BA6NC51 233 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 GOLGA8KD6RF30 607 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 SLC16A4O15374 487 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 ATP9AO75110 1047 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 LRRN2O75325 713 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 CCNE2O96020 404 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 ZBTB48P10074 688 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 CCND2P30279 289 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 PPP3CAQ08209 521 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 EPC2Q52LR7 807 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 DCAF15Q66K64 600 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 TSEN2Q8NCE0 465 aaKnown RBP17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 SLC35G2Q8TBE7 412 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 CASKIN2Q8WXE0 1202 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 ATG4CQ96DT6 458 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 SH2D3AQ9BRG2 576 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 UBE2TQ9NPD8 197 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 RNF146Q9NTX7 359 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 RGS17Q9UGC6 210 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 ESYT3A0FGR9 886 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 GOLGA6CA6NDK9 693 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 ZSCAN5CA6NGD5 496 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 FOXN3O00409 490 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 GOLGA6DP0CG33 693 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 GCLMP48507 274 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 PLA2G4FQ68DD2 849 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 DEFB132Q7Z7B7 95 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 MICALL2Q8IY33 904 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 RASGEF1CQ8N431 466 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 FAM76AQ8TAV0 307 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 HES6Q96HZ4 224 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 AGPAT1Q99943 283 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 AS3MTQ9HBK9 375 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 GPRC5CQ9NQ84 441 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 GOLGA6AQ9NYA3 693 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 HACL1Q9UJ83 578 aa17.96■□□□□ 0.47
PRKCSH-217ENST00000592741 CCDC188H7C350 402 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 ABCB4P21439 1286 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 SMTNP53814 917 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 NLRX1Q86UT6 975 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 ARHGEF19Q8IW93 802 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 WHAMMQ8TF30 809 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 HVCN1Q96D96 273 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 SH3GL2Q99962 352 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 PLEKHA4Q9H4M7 779 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 OSGEPQ9NPF4 335 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 CWC15Q9P013 229 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 PARP14Q460N5 1801 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 ANKRD62A6NC57 917 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 BUB1BO60566 1050 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 GMPSP49915 693 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 MXI1P50539 228 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 BACE1P56817 501 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 PPFIA1Q13136 1202 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 BAATQ14032 418 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 ZNF746Q6NUN9 644 aaPredicted RBP17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 SAMD7Q7Z3H4 446 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 SCYL3Q8IZE3 742 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 GPRASP2Q96D09 838 aa17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 MOV10L1Q9BXT6 1211 aaKnown RBP17.95■□□□□ 0.46
PRKCSH-217ENST00000592741 NFKBIEO00221 500 aa17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 PMM2O15305 246 aa17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 DMP1Q13316 513 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 TBC1D10BQ4KMP7 808 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 C1orf220Q5T0J3 134 aa17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 NBPF12Q5TAG4 269 aaPredicted RBP17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 TRMT1LQ7Z2T5 733 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-217ENST00000592741 MREGQ8N565 214 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms