RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 LTBRP36941 435 aa15.45■□□□□ 0.06
APOC1-208ENST00000592535 PBX3P40426 434 aa15.45■□□□□ 0.06
APOC1-208ENST00000592535 TOB1P50616 345 aaPredicted RBP15.45■□□□□ 0.06
APOC1-208ENST00000592535 UBE3AQ05086 875 aa15.45■□□□□ 0.06
APOC1-208ENST00000592535 C4orf32Q8N8J7 132 aa15.45■□□□□ 0.06
APOC1-208ENST00000592535 ASAP3Q8TDY4 903 aa15.45■□□□□ 0.06
APOC1-208ENST00000592535 SPTBN5Q9NRC6 3674 aaKnown RBP15.45■□□□□ 0.06
APOC1-208ENST00000592535 XIRP2A4UGR9 3374 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 MEIS3P2A8K0S8 358 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 LINC01565O15544 149 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 NCK2O43639 380 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 SKIP12755 728 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 XRCC6P12956 609 aaKnown RBP eCLIP15.44■□□□□ 0.06
APOC1-208ENST00000592535 IL9P15248 144 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 ARL2P36404 184 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 RAB27AP51159 221 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 PTENP60484 403 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 DLX2Q07687 328 aaPredicted RBP15.44■□□□□ 0.06
APOC1-208ENST00000592535 CAPSQ13938 189 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 MXD4Q14582 209 aaPredicted RBP15.44■□□□□ 0.06
APOC1-208ENST00000592535 CSPP1Q1MSJ5 1256 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 CTC1Q2NKJ3 1217 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 PTCRAQ6ISU1 281 aaPredicted RBP15.44■□□□□ 0.06
APOC1-208ENST00000592535 POTEGQ6S5H5 508 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 KCNT2Q6UVM3 1135 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 ERMNQ8TAM6 284 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 ZNF558Q96NG5 402 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 POLR3CQ9BUI4 534 aaPredicted RBP15.44■□□□□ 0.06
APOC1-208ENST00000592535 TLR9Q9NR96 1032 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 KIF3AQ9Y496 699 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 PCDHB6Q9Y5E3 794 aa15.44■□□□□ 0.06
APOC1-208ENST00000592535 ZNF623O75123 536 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 GLRA2P23416 452 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 RPA1P27694 616 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 GJB2P29033 226 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 HOXA11P31270 313 aaPredicted RBP15.43■□□□□ 0.06
APOC1-208ENST00000592535 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
APOC1-208ENST00000592535 ERVFC1P60507 584 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 PLCB3Q01970 1234 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 TFDP1Q14186 410 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 UBXN11Q5T124 520 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 MAEAQ7L5Y9 396 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 RBM23Q86U06 439 aaKnown RBP15.43■□□□□ 0.06
APOC1-208ENST00000592535 MICAL1Q8TDZ2 1067 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 MRPS27Q92552 414 aaKnown RBP15.43■□□□□ 0.06
APOC1-208ENST00000592535 PPP2R3CQ969Q6 453 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 NACC1Q96RE7 527 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 MRPL9Q9BYD2 267 aaKnown RBP15.43■□□□□ 0.06
APOC1-208ENST00000592535 POLR3FQ9H1D9 316 aaPredicted RBP15.43■□□□□ 0.06
APOC1-208ENST00000592535 GPRC5CQ9NQ84 441 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 DBR1Q9UK59 544 aaKnown RBP15.43■□□□□ 0.06
APOC1-208ENST00000592535 PCDHB2Q9Y5E7 798 aa15.43■□□□□ 0.06
APOC1-208ENST00000592535 GRXCR2A6NFK2 248 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 INO80B-WBP1J3KQ70 363 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 FSCN2O14926 492 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 TSPAN1O60635 241 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 TBX10O75333 385 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 ERLIN2O94905 339 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 NRIP1P48552 1158 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 MCM2P49736 904 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 PTGDRQ13258 359 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 ADAM15Q13444 863 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 ECM1Q16610 540 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 MCTP1Q6DN14 999 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 GLB1LQ6UWU2 654 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 IFNLR1Q8IU57 520 aaPredicted RBP15.42■□□□□ 0.06
APOC1-208ENST00000592535 SLC39A11Q8N1S5 342 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 SPG21Q9NZD8 308 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 LZTS1Q9Y250 596 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 INPP5FQ9Y2H2 1132 aa15.42■□□□□ 0.06
APOC1-208ENST00000592535 NT5C1B-RDH14C9J2C7 533 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 OFD1O75665 1012 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 PPM1AP35813 382 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 CCT6AP40227 531 aaKnown RBP15.41■□□□□ 0.06
APOC1-208ENST00000592535 BCAR1P56945 870 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 MBTD1Q05BQ5 628 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 POU5F1BQ06416 359 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 CLUL1Q15846 466 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 PUS10Q3MIT2 529 aaKnown RBP15.41■□□□□ 0.06
APOC1-208ENST00000592535 NOMO2Q5JPE7 1267 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 HAUS3Q68CZ6 603 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 AGMOQ6ZNB7 445 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 MRPL10Q7Z7H8 261 aaKnown RBP15.41■□□□□ 0.06
APOC1-208ENST00000592535 EFHBQ8N7U6 833 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 PGBD4Q96DM1 585 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 CPB2Q96IY4 423 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.41■□□□□ 0.06
APOC1-208ENST00000592535 TBC1D13Q9NVG8 400 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 LRWD1Q9UFC0 647 aa15.41■□□□□ 0.06
APOC1-208ENST00000592535 PUF60Q9UHX1 559 aaKnown RBP15.41■□□□□ 0.06
APOC1-208ENST00000592535 TDRD15B5MCY1 1934 aaKnown RBP15.41■□□□□ 0.06
APOC1-208ENST00000592535 ARHGEF35A5YM69 484 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 PER2O15055 1255 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 ZC3H11AO75152 810 aaKnown RBP eCLIP15.4■□□□□ 0.06
APOC1-208ENST00000592535 NDUFV1P49821 464 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 PCBP1Q15365 356 aaKnown RBP eCLIP15.4■□□□□ 0.06
APOC1-208ENST00000592535 IL17AQ16552 155 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 AMHR2Q16671 573 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 PLPP4Q5VZY2 271 aa15.4■□□□□ 0.06
APOC1-208ENST00000592535 PADI6Q6TGC4 694 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms