RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 PBX3P40426 434 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 RAB27AP51159 221 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 LRRC55Q6ZSA7 311 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 NACC1Q96RE7 527 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 UHRF1Q96T88 793 aaPredicted RBP16.89■□□□□ 0.29
ERCC1-213ENST00000592023 TRAIPQ9BWF2 469 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 BACH2Q9BYV9 841 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 GPRC5CQ9NQ84 441 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 LRWD1Q9UFC0 647 aa16.89■□□□□ 0.29
ERCC1-213ENST00000592023 ARHGEF35A5YM69 484 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 MEIS3P2A8K0S8 358 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 INO80B-WBP1J3KQ70 363 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 FGF18O76093 207 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 SKIP12755 728 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 XRCC6P12956 609 aaKnown RBP eCLIP16.88■□□□□ 0.29
ERCC1-213ENST00000592023 GLRA2P23416 452 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 ARL2P36404 184 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 PTENP60484 403 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 RILPL1Q5EBL4 403 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 SNX29Q8TEQ0 813 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 PABPC5Q96DU9 382 aaKnown RBP16.88■□□□□ 0.29
ERCC1-213ENST00000592023 ZNF558Q96NG5 402 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 MRPL9Q9BYD2 267 aaKnown RBP16.88■□□□□ 0.29
ERCC1-213ENST00000592023 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.88■□□□□ 0.29
ERCC1-213ENST00000592023 CLDND1Q9NY35 253 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 DBR1Q9UK59 544 aaKnown RBP16.88■□□□□ 0.29
ERCC1-213ENST00000592023 INPP5FQ9Y2H2 1132 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 PCDHGC5Q9Y5F6 944 aa16.88■□□□□ 0.29
ERCC1-213ENST00000592023 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-213ENST00000592023 LRRIQ4A6NIV6 560 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 PP2D1A8MPX8 630 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 H3BQ06 376 aaPredicted RBP16.87■□□□□ 0.29
ERCC1-213ENST00000592023 TSPAN1O60635 241 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 GTF2F1P35269 517 aaKnown RBP eCLIP16.87■□□□□ 0.298e-9■■■■■ 31.3
ERCC1-213ENST00000592023 MBTD1Q05BQ5 628 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 HYAL1Q12794 435 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 ECM1Q16610 540 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 CSPP1Q1MSJ5 1256 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 GLB1LQ6UWU2 654 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 ADGRD2Q7Z7M1 963 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 MCPH1Q8NEM0 835 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 RAB34Q9BZG1 259 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 IGFLR1Q9H665 355 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 PCDHB2Q9Y5E7 798 aa16.87■□□□□ 0.29
ERCC1-213ENST00000592023 LAD1O00515 517 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 HOXA11P31270 313 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-213ENST00000592023 UBE3AQ05086 875 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 UBXN11Q5T124 520 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 LARP1BQ659C4 914 aaKnown RBP16.86■□□□□ 0.29
ERCC1-213ENST00000592023 PADI6Q6TGC4 694 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 IFNLR1Q8IU57 520 aaPredicted RBP16.86■□□□□ 0.29
ERCC1-213ENST00000592023 IGSF22Q8N9C0 903 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 PPP2R3CQ969Q6 453 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 CPB2Q96IY4 423 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 TLR9Q9NR96 1032 aa16.86■□□□□ 0.29
ERCC1-213ENST00000592023 TNFRSF10AO00220 468 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 LINC01565O15544 149 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 ZC3H11AO75152 810 aaKnown RBP eCLIP16.85■□□□□ 0.29
ERCC1-213ENST00000592023 MUTP22033 750 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 PPM1AP35813 382 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 PRPHP41219 470 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 ATP2C1P98194 919 aaPredicted RBP16.85■□□□□ 0.29
ERCC1-213ENST00000592023 COL19A1Q14993 1142 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 IL17AQ16552 155 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 LEXMQ3ZCV2 418 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 DTHD1Q6ZMT9 781 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 MICAL1Q8TDZ2 1067 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 PGBD4Q96DM1 585 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 EIF2AQ9BY44 585 aaKnown RBP16.85■□□□□ 0.29
ERCC1-213ENST00000592023 BHMT2Q9H2M3 363 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 DDX19AQ9NUU7 478 aaKnown RBP16.85■□□□□ 0.29
ERCC1-213ENST00000592023 KIAA1024Q9UPX6 916 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 MYO7AQ13402 2215 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 BRWD1Q9NSI6 2320 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 VCANP13611 3396 aa16.85■□□□□ 0.29
ERCC1-213ENST00000592023 VPS37CA5D8V6 355 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-213ENST00000592023 B4GALT5O43286 388 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 ZNF623O75123 536 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 TBX10O75333 385 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 CDC25AP30304 524 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 NRIP1P48552 1158 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 POU5F1BQ06416 359 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 CUL4AQ13619 759 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 PCBP1Q15365 356 aaKnown RBP eCLIP16.84■□□□□ 0.29
ERCC1-213ENST00000592023 AMHR2Q16671 573 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 NOMO2Q5JPE7 1267 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 KRT79Q5XKE5 535 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 NOTUMQ6P988 496 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 AGMOQ6ZNB7 445 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 RBM23Q86U06 439 aaKnown RBP16.84■□□□□ 0.29
ERCC1-213ENST00000592023 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.84■□□□□ 0.29
ERCC1-213ENST00000592023 BSNDQ8WZ55 320 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 MRPS27Q92552 414 aaKnown RBP16.84■□□□□ 0.29
ERCC1-213ENST00000592023 NFKBIZQ9BYH8 718 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 GBP3Q9H0R5 595 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 RSAD1Q9HA92 442 aa16.84■□□□□ 0.29
ERCC1-213ENST00000592023 ENTPD7Q9NQZ7 604 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms