RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 IFT122Q9HBG6 1241 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 AAASQ9NRG9 546 aa11.16□□□□□ -0.62
BRCA1-227ENST00000591849 A0A0U1RQF3 1178 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 CCDC169A6NNP5 214 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 SLC26A4O43511 780 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 EOMESO95936 686 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 KRT18P05783 430 aaKnown RBP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 RB1P06400 928 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 ZSCAN22P10073 491 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 FGFR1P11362 822 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 AXLP30530 894 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 GATMP50440 423 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 RAB27AP51159 221 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 FAM189BP81408 668 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 GRB10Q13322 594 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 CAPSQ13938 189 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 ADGRE1Q14246 886 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 DHX8Q14562 1220 aaKnown RBP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 PCBP1Q15365 356 aaKnown RBP eCLIP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 FOXD4L6Q3SYB3 417 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 FOXD4L3Q6VB84 417 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 SPRED2Q7Z698 418 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 ZNF689Q96CS4 500 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 TRIM6Q9C030 488 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 TMEM117Q9H0C3 514 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 MINDY3Q9H8M7 445 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 POLD4Q9HCU8 107 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 TFIP11Q9UBB9 837 aaKnown RBP11.15□□□□□ -0.62
BRCA1-227ENST00000591849 CCDC39Q9UFE4 941 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 PCDHB12Q9Y5F1 795 aa11.15□□□□□ -0.62
BRCA1-227ENST00000591849 EVPLQ92817 2033 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 EPOPA6NHQ4 379 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 LONRF3Q496Y0 759 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 NOTUMQ6P988 496 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 HACE1Q8IYU2 909 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 CNNM3Q8NE01 707 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 DRC1Q96MC2 740 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 MMTAG2Q9BU76 263 aaKnown RBP11.14□□□□□ -0.63
BRCA1-227ENST00000591849 C11orf84Q9BUA3 381 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-227ENST00000591849 CSRNP2Q9H175 543 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 AGPAT5Q9NUQ2 364 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 FAM105AQ9NUU6 356 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 DAXXQ9UER7 740 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-227ENST00000591849 KCNG1Q9UIX4 513 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 MRPL42Q9Y6G3 142 aaKnown RBP11.14□□□□□ -0.63
BRCA1-227ENST00000591849 TRANK1O15050 2925 aa11.14□□□□□ -0.63
BRCA1-227ENST00000591849 H3BNC9 293 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 HIP1RO75146 1068 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 CSPG5O95196 566 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 PLA2G4BP0C869 781 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 ITGA4P13612 1032 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 NAMPTP43490 491 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 RNASELQ05823 741 aaKnown RBP11.13□□□□□ -0.63
BRCA1-227ENST00000591849 MBTD1Q05BQ5 628 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 RAD51AP2Q09MP3 1159 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 DMP1Q13316 513 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-227ENST00000591849 SLC39A14Q15043 492 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 PTPAQ15257 358 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 MAPK6Q16659 721 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 SPECC1Q5M775 1068 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 HYIQ5T013 277 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 RINT1Q6NUQ1 792 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 GLB1LQ6UWU2 654 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-227ENST00000591849 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
BRCA1-227ENST00000591849 URGCPQ8TCY9 931 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 HELQQ8TDG4 1101 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 CCDC51Q96ER9 411 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 CPB2Q96IY4 423 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 PNMA5Q96PV4 448 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 USP28Q96RU2 1077 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 TIPINQ9BVW5 301 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 PLVAPQ9BX97 442 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 TYW1Q9NV66 732 aaKnown RBP11.13□□□□□ -0.63
BRCA1-227ENST00000591849 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-227ENST00000591849 LMCD1Q9NZU5 365 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 INPP5FQ9Y2H2 1132 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 PCDHB2Q9Y5E7 798 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 SRPRBQ9Y5M8 271 aaKnown RBP11.13□□□□□ -0.63
BRCA1-227ENST00000591849 MTCH2Q9Y6C9 303 aa11.13□□□□□ -0.63
BRCA1-227ENST00000591849 K7ERI5 159 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 SPTLC2O15270 562 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 TSPAN1O60635 241 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 F13A1P00488 732 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 PRKCBP05771 671 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 LAG3P18627 525 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 HOXA11P31270 313 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 EFNA5P52803 228 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 SMTNP53814 917 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 PEX3P56589 373 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 GRIN1Q05586 938 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 PRPF4BQ13523 1007 aaKnown RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 KARSQ15046 597 aaKnown RBP11.12□□□□□ -0.63
BRCA1-227ENST00000591849 CSPP1Q1MSJ5 1256 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 NAALADL2Q58DX5 795 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 RRAGBQ5VZM2 374 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 C1orf186Q6ZWK4 172 aa11.12□□□□□ -0.63
BRCA1-227ENST00000591849 KCNK18Q7Z418 384 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms