RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 METAP2P50579 478 aaKnown RBP eCLIP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 EXOSC10Q01780 885 aaKnown RBP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 PLCB3Q01970 1234 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 NHLH1Q02575 133 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 PFKFB3Q16875 520 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 KIZQ2M2Z5 673 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 JAKMIP3Q5VZ66 844 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 TRIM67Q6ZTA4 783 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 ADGRD2Q7Z7M1 963 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 CCDC60Q8IWA6 550 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 ARMC2Q8NEN0 867 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 BAP1Q92560 729 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 PGBD1Q96JS3 809 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 TMEM117Q9H0C3 514 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 TYW1Q9NV66 732 aaKnown RBP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 AKT3Q9Y243 479 aa10.65□□□□□ -0.7
BRCA1-226ENST00000591534 FCF1Q9Y324 198 aaKnown RBP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 USP15Q9Y4E8 981 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 MAFBQ9Y5Q3 323 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-226ENST00000591534 DOCK5Q9H7D0 1870 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 TTC3P53804 2025 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 KAT6AQ92794 2004 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 TMEM221A6NGB7 291 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 WDR64B1ANS9 1081 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 FAM86B1E9PN63 330 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 RBAK-RBAKDNI3L0D1 243 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 M0R296 226 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 C22orf31O95567 290 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 FAM86B2P0C5J1 330 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 ANP32AP39687 249 aaKnown RBP10.64□□□□□ -0.71
BRCA1-226ENST00000591534 FAM189BP81408 668 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 ZXDAP98168 799 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 CBX2Q14781 532 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-226ENST00000591534 DUSP6Q16828 381 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 LINC01559Q495D7 138 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 FAM102BQ5T8I3 360 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 ZBTB33Q86T24 672 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 COLGALT1Q8NBJ5 622 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 TMEM87AQ8NBN3 555 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 CCDC148Q8NFR7 591 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 MRPS27Q92552 414 aaKnown RBP10.64□□□□□ -0.71
BRCA1-226ENST00000591534 ZNF558Q96NG5 402 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 SCLT1Q96NL6 688 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 OSMRQ99650 979 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 ZMYND12Q9H0C1 365 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 ENTPD7Q9NQZ7 604 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 DACT1Q9NYF0 836 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 BRPF3Q9ULD4 1205 aa10.64□□□□□ -0.71
BRCA1-226ENST00000591534 BARX2Q9UMQ3 279 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-226ENST00000591534 PER2O15055 1255 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 DHX15O43143 795 aaKnown RBP10.63□□□□□ -0.71
BRCA1-226ENST00000591534 MGEA5O60502 916 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 EOMESO95936 686 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 SKIP12755 728 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 EIF4BP23588 611 aaKnown RBP10.63□□□□□ -0.71
BRCA1-226ENST00000591534 SFNP31947 248 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 GATMP50440 423 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 DNM2P50570 870 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 SIGLEC14Q08ET2 396 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 PRR16Q569H4 304 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 CES5AQ6NT32 575 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 EFCAB12Q6NXP0 572 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 TMEM184AQ6ZMB5 413 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 TMC7Q7Z402 723 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 RASGRP4Q8TDF6 673 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 CASP10Q92851 521 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 RPGRIP1Q96KN7 1286 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 NECTIN4Q96NY8 510 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 TCF25Q9BQ70 676 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 MRPL9Q9BYD2 267 aaKnown RBP10.63□□□□□ -0.71
BRCA1-226ENST00000591534 C22orf23Q9BZE7 217 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 SPG21Q9NZD8 308 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 GABBR1Q9UBS5 961 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 NR2E1Q9Y466 385 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 PCDHB9Q9Y5E1 797 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 PIEZO1Q92508 2521 aa10.63□□□□□ -0.71
BRCA1-226ENST00000591534 MUC6Q6W4X9 2439 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 IGLV3-22A0A075B6J6 115 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 ZBTB42B2RXF5 422 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 PRPF3O43395 683 aaKnown RBP10.62□□□□□ -0.71
BRCA1-226ENST00000591534 GPR32O75388 356 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 GLP2RO95838 553 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 VTNP04004 478 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 FGFR1P11362 822 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 CIITAP33076 1130 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 ADD1P35611 737 aaKnown RBP10.62□□□□□ -0.71
BRCA1-226ENST00000591534 TECP42680 631 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 ALDH7A1P49419 539 aaKnown RBP10.62□□□□□ -0.71
BRCA1-226ENST00000591534 USP11P51784 963 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 JAK3P52333 1124 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 NLRP11P59045 1033 aaKnown RBP10.62□□□□□ -0.71
BRCA1-226ENST00000591534 TBC1D8BQ0IIM8 1120 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 SMC1AQ14683 1233 aaKnown RBP10.62□□□□□ -0.71
BRCA1-226ENST00000591534 PLPP4Q5VZY2 271 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 KCNT2Q6UVM3 1135 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 TRMT1LQ7Z2T5 733 aaKnown RBP10.62□□□□□ -0.71
BRCA1-226ENST00000591534 FAM228AQ86W67 206 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 FBXL6Q8N531 539 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms