RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 TRAIPQ9BWF2 469 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 CHST12Q9NRB3 414 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
VPS4B-207ENST00000591519 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.53
VPS4B-207ENST00000591519 LOC730098B7Z3J9 87 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 CPLX1O14810 134 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 TDP2O95551 362 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 TBC1D8BQ0IIM8 1120 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 CBX2Q14781 532 aaPredicted RBP11.7□□□□□ -0.54
VPS4B-207ENST00000591519 CPLX2Q6PUV4 134 aaKnown RBP11.7□□□□□ -0.54
VPS4B-207ENST00000591519 KCNT2Q6UVM3 1135 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 MIER3Q7Z3K6 550 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 RBM23Q86U06 439 aaKnown RBP11.7□□□□□ -0.54
VPS4B-207ENST00000591519 THNSL1Q8IYQ7 743 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 RSPH1Q8WYR4 309 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 SUSD6Q92537 303 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 GJA10Q969M2 543 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 KCNH6Q9H252 994 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 NGRNQ9NPE2 291 aaKnown RBP11.7□□□□□ -0.54
VPS4B-207ENST00000591519 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 PCDHGC5Q9Y5F6 944 aa11.7□□□□□ -0.54
VPS4B-207ENST00000591519 C5orf42Q9H799 3197 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 PER2O15055 1255 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 CSPG5O95196 566 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 ATF7P17544 494 aaPredicted RBP11.69□□□□□ -0.54
VPS4B-207ENST00000591519 IBSPP21815 317 aaPredicted RBP11.69□□□□□ -0.54
VPS4B-207ENST00000591519 PPM1AP35813 382 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 DNM2P50570 870 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 KRT17Q04695 432 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 DRP2Q13474 957 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
VPS4B-207ENST00000591519 PPP4R3AQ6IN85 833 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 BMP8AQ7Z5Y6 402 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 LRRC43Q8N309 656 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 VN1R2Q8NFZ6 395 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 EDAQ92838 391 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 FAM20AQ96MK3 541 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 ZNF558Q96NG5 402 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 PHF20Q9BVI0 1012 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 PHF7Q9BWX1 381 aaPredicted RBP11.69□□□□□ -0.54
VPS4B-207ENST00000591519 GCOM2Q9BZD3 368 aaPredicted RBP11.69□□□□□ -0.54
VPS4B-207ENST00000591519 S1PR5Q9H228 398 aa11.69□□□□□ -0.54
VPS4B-207ENST00000591519 BARX2Q9UMQ3 279 aaPredicted RBP11.69□□□□□ -0.54
VPS4B-207ENST00000591519 CHMP2AO43633 222 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 ZNF623O75123 536 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 MAFO75444 373 aaPredicted RBP11.68□□□□□ -0.54
VPS4B-207ENST00000591519 PSMC5P62195 406 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 PPP2R5CQ13362 524 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 CLLU1OSQ5K130 101 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 ANO5Q75V66 913 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 KRT25Q7Z3Z0 450 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 ZNF410Q86VK4 478 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 ABI1Q8IZP0 508 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 MRPL43Q8N983 215 aaKnown RBP11.68□□□□□ -0.54
VPS4B-207ENST00000591519 NLRP7Q8WX94 980 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 AIFM3Q96NN9 605 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 INO80BQ9C086 356 aaPredicted RBP11.68□□□□□ -0.54
VPS4B-207ENST00000591519 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 WDR70Q9NW82 654 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 SPG21Q9NZD8 308 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 DDX25Q9UHL0 483 aaKnown RBP11.68□□□□□ -0.54
VPS4B-207ENST00000591519 MUTYHQ9UIF7 546 aa11.68□□□□□ -0.54
VPS4B-207ENST00000591519 USP15Q9Y4E8 981 aaPredicted RBP11.68□□□□□ -0.54
VPS4B-207ENST00000591519 MUC6Q6W4X9 2439 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 A0A087WZ62 844 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 CARNS1A5YM72 827 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 DDX11L8A8MPP1 907 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 EML1O00423 815 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 TBX3O15119 743 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 RNF40O75150 1001 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 CDKL5O76039 1030 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 SKIP12755 728 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 GCFC2P16383 781 aaKnown RBP11.67□□□□□ -0.54
VPS4B-207ENST00000591519 HOXB8P17481 243 aaPredicted RBP11.67□□□□□ -0.54
VPS4B-207ENST00000591519 FGFR4P22455 802 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 QARSP47897 775 aaKnown RBP11.67□□□□□ -0.54
VPS4B-207ENST00000591519 RBM10P98175 930 aaKnown RBP11.67□□□□□ -0.54
VPS4B-207ENST00000591519 SCRN1Q12765 414 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 INF2Q27J81 1249 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 MTERF2Q49AM1 385 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 SYCE2Q6PIF2 218 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 SLC39A11Q8N1S5 342 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 TATDN2Q93075 761 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 ZNF668Q96K58 619 aaPredicted RBP11.67□□□□□ -0.54
VPS4B-207ENST00000591519 TCF25Q9BQ70 676 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 JPH2Q9BR39 696 aaPredicted RBP11.67□□□□□ -0.54
VPS4B-207ENST00000591519 FDXACB1Q9BRP7 624 aaPredicted RBP11.67□□□□□ -0.54
VPS4B-207ENST00000591519 KCNMB3Q9NPA1 279 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 SUCLA2Q9P2R7 463 aaPredicted RBP11.67□□□□□ -0.54
VPS4B-207ENST00000591519 VAV3Q9UKW4 847 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 PPME1Q9Y570 386 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 TECTAO75443 2155 aa11.67□□□□□ -0.54
VPS4B-207ENST00000591519 STK36Q9NRP7 1315 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 TMEM150BA6NC51 233 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 HIDE1A8MVS5 230 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 SLC37A4O43826 429 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 PFKFB2O60825 505 aa11.66□□□□□ -0.54
VPS4B-207ENST00000591519 DKC1O60832 514 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS4B-207ENST00000591519 CSDE1O75534 798 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms