RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 M0R296 226 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 MARCH6O60337 910 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 CXCL14O95715 111 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 RAB27AP51159 221 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 GLB1LQ6UWU2 654 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 BMP8AQ7Z5Y6 402 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 RSPH1Q8WYR4 309 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 NAP1L4Q99733 375 aaKnown RBP24.36■■□□□ 1.49
DDX39A-215ENST00000590696 INPP5FQ9Y2H2 1132 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 HCFC2Q9Y5Z7 792 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 MUC6Q6W4X9 2439 aa24.36■■□□□ 1.49
DDX39A-215ENST00000590696 TECTAO75443 2155 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 TBX3O15119 743 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 CLASP2O75122 1294 aaKnown RBP24.35■■□□□ 1.49
DDX39A-215ENST00000590696 ZNF623O75123 536 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 POLGP54098 1239 aaPredicted RBP24.35■■□□□ 1.49
DDX39A-215ENST00000590696 BMS1Q14692 1282 aaKnown RBP24.35■■□□□ 1.49
DDX39A-215ENST00000590696 EPHA7Q15375 998 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 NOMO2Q5JPE7 1267 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 ALYREFQ86V81 257 aaKnown RBP24.35■■□□□ 1.49
DDX39A-215ENST00000590696 TMEM173Q86WV6 379 aaPredicted RBP24.35■■□□□ 1.49
DDX39A-215ENST00000590696 EXOC8Q8IYI6 725 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 VPS52Q8N1B4 723 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 PRPF31Q8WWY3 499 aaKnown RBP24.35■■□□□ 1.49
DDX39A-215ENST00000590696 TMEM143Q96AN5 459 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 PBXIP1Q96AQ6 731 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 DHX33Q9H6R0 707 aaKnown RBP24.35■■□□□ 1.49
DDX39A-215ENST00000590696 NRDE2Q9H7Z3 1164 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 TBC1D13Q9NVG8 400 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 PPME1Q9Y570 386 aa24.35■■□□□ 1.49
DDX39A-215ENST00000590696 OFD1O75665 1012 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 CTDNEP1O95476 244 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 SRGAP2CP0DJJ0 459 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 TPRNQ4KMQ1 711 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 EARS2Q5JPH6 523 aaKnown RBP24.34■■□□□ 1.49
DDX39A-215ENST00000590696 NCAPH2Q6IBW4 605 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 POTEDQ86YR6 584 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 C4orf19Q8IY42 314 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 PSPC1Q8WXF1 523 aaKnown RBP24.34■■□□□ 1.49
DDX39A-215ENST00000590696 PGBD4Q96DM1 585 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 LXNQ9BS40 222 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 ZBP1Q9H171 429 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 BMP2KQ9NSY1 1161 aaPredicted RBP24.34■■□□□ 1.49
DDX39A-215ENST00000590696 AGPAT5Q9NUQ2 364 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 RGL1Q9NZL6 768 aa24.34■■□□□ 1.49
DDX39A-215ENST00000590696 ORC3Q9UBD5 711 aaPredicted RBP24.34■■□□□ 1.49
DDX39A-215ENST00000590696 GALTP07902 379 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 SP100P23497 879 aaPredicted RBP24.33■■□□□ 1.49
DDX39A-215ENST00000590696 YWHABP31946 246 aaKnown RBP24.33■■□□□ 1.49
DDX39A-215ENST00000590696 RFC5P40937 340 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 NHLH1Q02575 133 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 RNASELQ05823 741 aaKnown RBP24.33■■□□□ 1.49
DDX39A-215ENST00000590696 OTUD6AQ7L8S5 288 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 AUTS2Q8WXX7 1259 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 IGSF21Q96ID5 467 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 DYDC2Q96IM9 177 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 GBP3Q9H0R5 595 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 MINDY3Q9H8M7 445 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 CDH22Q9UJ99 828 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 PCDHB2Q9Y5E7 798 aa24.33■■□□□ 1.49
DDX39A-215ENST00000590696 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.32■■□□□ 1.48
DDX39A-215ENST00000590696 CARNS1A5YM72 827 aa24.32■■□□□ 1.48
DDX39A-215ENST00000590696 FAM205CA6NFA0 338 aa24.32■■□□□ 1.48
DDX39A-215ENST00000590696 AK2P54819 239 aa24.32■■□□□ 1.48
DDX39A-215ENST00000590696 LAMTOR4Q0VGL1 99 aa24.32■■□□□ 1.48
DDX39A-215ENST00000590696 CES5AQ6NT32 575 aa24.32■■□□□ 1.48
DDX39A-215ENST00000590696 SRGAP1Q7Z6B7 1085 aa24.32■■□□□ 1.48
DDX39A-215ENST00000590696 DDX53Q86TM3 631 aaKnown RBP24.32■■□□□ 1.48
DDX39A-215ENST00000590696 BCL7CQ8WUZ0 217 aaPredicted RBP24.32■■□□□ 1.48
DDX39A-215ENST00000590696 WASF1Q92558 559 aa24.32■■□□□ 1.48
DDX39A-215ENST00000590696 DNAJB4Q9UDY4 337 aa24.32■■□□□ 1.48
DDX39A-215ENST00000590696 ZBTB39O15060 712 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 BAG4O95429 457 aaKnown RBP24.31■■□□□ 1.48
DDX39A-215ENST00000590696 ITIH3Q06033 890 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 SPIRE1Q08AE8 756 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 SIGLEC14Q08ET2 396 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 NR5A1Q13285 461 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 CTTNQ14247 550 aaKnown RBP24.31■■□□□ 1.48
DDX39A-215ENST00000590696 ANKRD1Q15327 319 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 XKR9Q5GH70 373 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 AGMOQ6ZNB7 445 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 SLFN12Q8IYM2 578 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 TMEM87AQ8NBN3 555 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 TCP11Q8WWU5 503 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 ADAM7Q9H2U9 754 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 ZSWIM4Q9H7M6 989 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 WDFY4Q6ZS81 3184 aa24.31■■□□□ 1.48
DDX39A-215ENST00000590696 CTSAP10619 480 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 FDPSP14324 419 aaKnown RBP24.3■■□□□ 1.48
DDX39A-215ENST00000590696 HOXA11P31270 313 aaPredicted RBP24.3■■□□□ 1.48
DDX39A-215ENST00000590696 KRT2P35908 639 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 SLC11A1P49279 550 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 ANAPC15P60006 121 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 CYP4A11Q02928 519 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 EMC2Q15006 297 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 PTPN21Q16825 1174 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 MRPL10Q7Z7H8 261 aaKnown RBP24.3■■□□□ 1.48
DDX39A-215ENST00000590696 ZNF280BQ86YH2 543 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 URGCPQ8TCY9 931 aa24.3■■□□□ 1.48
DDX39A-215ENST00000590696 POMKQ9H5K3 350 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms